Evidence map›Paper›PMID 31858786›Full record

ArticleChemical research in toxicology2020

CRISPR-Generated Nrf2a Loss- and Gain-of-Function Mutants Facilitate Mechanistic Analysis of Chemical Oxidative Stress-Mediated Toxicity in Zebrafish.

Margaret G Mills, Richard Ramsden, Eva Y Ma, Jone Corrales, Lauren A Kristofco, W Baylor Steele, Gavin N Saari, Fjodor Melnikov, Jakub Kostal, Terrance J Kavanagh and 6 more

Open access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Margaret G MillsDepartment of Environmental and Occupational Health Sciences, School of Public Health , University of Washington , 4225 Roosevelt Way NE , Seattle , Washington 98105 , United States.ORCID 0000-0002-0493-9408
Richard RamsdenDepartment of Environmental and Occupational Health Sciences, School of Public Health , University of Washington , 4225 Roosevelt Way NE , Seattle , Washington 98105 , United States.
Eva Y MaDepartment of Environmental and Occupational Health Sciences, School of Public Health , University of Washington , 4225 Roosevelt Way NE , Seattle , Washington 98105 , United States.
Jone CorralesDepartment of Environmental Sciences , Baylor University , Baylor Sciences Building, One Bear Place #97266 , Waco Texas 76798 , United States.
Lauren A KristofcoDepartment of Environmental Sciences , Baylor University , Baylor Sciences Building, One Bear Place #97266 , Waco Texas 76798 , United States.
W Baylor SteeleDepartment of Environmental Sciences , Baylor University , Baylor Sciences Building, One Bear Place #97266 , Waco Texas 76798 , United States.
Gavin N SaariDepartment of Environmental Sciences , Baylor University , Baylor Sciences Building, One Bear Place #97266 , Waco Texas 76798 , United States.
Fjodor MelnikovSchool of Forestry and Environmental Science , Yale University , 195 Prospect St. , New Haven , Connecticut 06511 , United States.ORCID 0000-0003-3743-1376
Jakub KostalDepartment of Chemistry , The George Washington University , Science & Engineering Hall, Suite 4000, 800 22nd St NW , Washington , DC 20052 , United States.
Terrance J KavanaghDepartment of Environmental and Occupational Health Sciences, School of Public Health , University of Washington , 4225 Roosevelt Way NE , Seattle , Washington 98105 , United States.ORCID 0000-0002-7213-103X
Julie B ZimmermanSchool of Forestry and Environmental Science , Yale University , 195 Prospect St. , New Haven , Connecticut 06511 , United States.ORCID 0000-0002-5392-312X
Adelina M Voutchkova-KostalDepartment of Chemistry , The George Washington University , Science & Engineering Hall, Suite 4000, 800 22nd St NW , Washington , DC 20052 , United States.ORCID 0000-0002-7016-5244
Bryan W BrooksDepartment of Environmental Sciences , Baylor University , Baylor Sciences Building, One Bear Place #97266 , Waco Texas 76798 , United States.ORCID 0000-0002-6277-9852
Philip CoishSchool of Forestry and Environmental Science , Yale University , 195 Prospect St. , New Haven , Connecticut 06511 , United States.
Paul T AnastasSchool of Forestry and Environmental Science , Yale University , 195 Prospect St. , New Haven , Connecticut 06511 , United States.ORCID 0000-0003-4777-5172
Evan GallagherDepartment of Environmental and Occupational Health Sciences, School of Public Health , University of Washington , 4225 Roosevelt Way NE , Seattle , Washington 98105 , United States.
Baylor University · USUniversity of Washington · USYale University · USGeorge Washington University · US

Funding

WILDLIFE BIOMARKER APPLICATIONS TO REMEDIATION DECISION MAKINGP42ES004696 · NIEHS · UNIVERSITY OF WASHINGTON · PI FURLONG, CLEMENT EUGENE · 1987 to 2021
$51.2M
XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Sheela Sathyanarayana · 1995 to 2026
$42.5M
NIEHS NIH HHS P30 ES007033NIEHS NIH HHS P42 ES004696
6 · The paper itself

Abstract

The transcription factor Nrf2a induces a cellular antioxidant response and provides protection against chemical-induced oxidative stress, as well as playing a critical role in development and disease. Zebrafish are a powerful model to study the role of Nrf2a in these processes but have been limited by reliance on transient gene knockdown techniques or mutants with only partial functional alteration. We developed several lines of zebrafish carrying different null (loss of function, LOF) or hyperactive (gain of function, GOF) mutations to facilitate our understanding of the Nrf2a pathway in protecting against oxidative stress. The mutants confirmed Nrf2a dependence for induction of the antioxidant genes

Indexed as

Gain of Function MutationLoss of Function MutationAnimalsBenzene DerivativesClustered Regularly Interspaced Short Palindromic RepeatsDose-Response Relationship, DrugNF-E2-Related Factor 2Oxidative Stresstert-ButylhydroperoxideZebrafishZebrafish ProteinsBenzene Derivativescumene hydroperoxidenfe2l2a protein, zebrafishNF-E2-Related Factor 2tert-ButylhydroperoxideZebrafish Proteins

Identifiers

PMID31858786
PMCPMC7749997
OpenAlexW2994772829

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.