Evidence map›Paper›PMID 31858443›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2020

Genomic information on Stenotrophomonas maltophilia ST264 isolated from a cystic fibrosis pediatric patient in Brazil.

Fabrina Seger Braga, Ana Paula D'Allincourt Carvalho Assef, Robson Souza Leão, Rodolpho Mattos Albano, Elizabeth Andrade Marques

Abstract readCase Reports
PubMed Full text at PMC Publisher
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Fabrina Seger BragaDepartamento de Microbiologia, Imunologia e Parasitologia, Faculdade de Ciências Médicas, Universidade do Estado do Rio de Janeiro, Avenida Boulevard 28 de Setembro, 87, fundos, 3° andar, Vila Isabel, Rio de Janeiro, RJ, 20551-030, Brazil.
Ana Paula D'Allincourt Carvalho AssefLaboratório de Pesquisa em Infecção Hospitalar (LAPIH), Instituto Oswaldo Cruz (FIOCRUZ), Avenida Brasil, 4.365, Pavilhão Rocha Lima - Sala 314, Manguinhos, Rio de Janeiro, RJ, 21040-360, Brazil.
Robson Souza LeãoDepartamento de Microbiologia, Imunologia e Parasitologia, Faculdade de Ciências Médicas, Universidade do Estado do Rio de Janeiro, Avenida Boulevard 28 de Setembro, 87, fundos, 3° andar, Vila Isabel, Rio de Janeiro, RJ, 20551-030, Brazil.
Rodolpho Mattos AlbanoDepartamento de Bioquímica, Instituto de Biologia Roberto Alcântara Gomes, Universidade do Estado do Rio de Janeiro, Avenida Boulevard 28 de Setembro, 87, 4°andar, Vila Isabel, Rio de Janeiro, RJ, 20551-030, Brazil.
Elizabeth Andrade MarquesDepartamento de Microbiologia, Imunologia e Parasitologia, Faculdade de Ciências Médicas, Universidade do Estado do Rio de Janeiro, Avenida Boulevard 28 de Setembro, 87, fundos, 3° andar, Vila Isabel, Rio de Janeiro, RJ, 20551-030, Brazil. marbe@uerj.br.ORCID http://orcid.org/0000-0003-3341-101X

Funding

SUBTHRESHOLD MUSCLE AFFERENT INPUT TO DORSAL HORNF06TW002012 · FIC · UNIVERSITY OF CALIFORNIA DAVIS · PI KAUFMAN, MARC PETER · 1995 to 1995
–
Conselho Nacional de Desenvolvimento Científico e Tecnológico 471480/2012-6Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro 26/110.742/2013
6 · The paper itself

Abstract

Stenotrophomonas maltophilia is one of the Gram-negative bacilli most frequently found in the airways of cystic fibrosis patients. This opportunistic pathogen is intrinsically multidrug-resistant, and therefore, its treatment presents a challenge. The genetic characterization of S. maltophilia is largely unknown, especially from those strains that colonize/infect the airways of cystic fibrosis patients. This work reports the draft genome sequences of three S. maltophilia isolates recovered from the sputum of a cystic fibrosis pediatric patient in Southeast Brazil. Several resistance- and virulence-related genes were detected. Furthermore, one intact phage and one incomplete prophage region were also identified in all strains. Multilocus sequence typing showed that all strains belonged to a new sequence type (ST264). Interestingly, all S. maltophilia strains were genetically identical, showing persistence for at least 16 months. To our knowledge, this is the first report of S. maltophilia draft genome sequences obtained from a cystic fibrosis pediatric patient in Brazil.

Indexed as

Genome, BacterialAnti-Bacterial AgentsBase SequenceBrazilCystic FibrosisGram-Negative Bacterial InfectionsHumansMicrobial Sensitivity TestsMultilocus Sequence TypingStenotrophomonas maltophiliaAnti-Bacterial AgentsCystic fibrosisGenome sequenceResistanceStenotrophomonas maltophiliaVirulence

Identifiers

PMID31858443
PMCPMC7455641

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.