Evidence map›Paper›PMID 31855962›Full record

ArticleChinese medical journal2019

Isobaric tags for relative and absolute quantitation-based quantitative proteomic analysis of X-linked inhibitor of apoptosis and H2AX in etoposide-induced renal cell carcinoma apoptosis.

Tian-Shu Liu, Chao Chen, Biao Zhou, Bo-Wen Xia, Zong-Ping Chen, Yong Yan

Open access · goldAbstract read
In one paragraph

Article in Chinese medical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Tian-Shu LiuDepartment of Urology, Beijing Shijitan Hospital, Capital Medical University, Beijing 100038, China.
Chao ChenDepartment of Urology, Beijing Shijitan Hospital, Capital Medical University, Beijing 100038, China.
Biao ZhouDepartment of Vascular Surgery, People's Hospital of Peking University, Beijing 100044, China.
Bo-Wen XiaDepartment of Urology, Beijing Shijitan Hospital, Capital Medical University, Beijing 100038, China.
Zong-Ping ChenDepartment of Urology, The Affiliated Hospital of Zunyi Medical College, Zunyi, Guizhou 563000, China.
Yong YanDepartment of Urology, Beijing Shijitan Hospital, Capital Medical University, Beijing 100038, China.
Capital Medical University · CNBeijing Shijitan Hospital · CNPeking University People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundX-linked inhibitor of apoptosis (XIAP) is a vital factor in the anti-apoptosis mechanism of tumors and is highly expressed in renal cell carcinoma (RCC). However, the mechanism through which XIAP regulates DNA damage repair is unknown. This study investigated the regulatory mechanism of XIAP in etoposide-induced apoptosis in two Caki-1 cell lines with high or low XIAP expression.

methodsThe two cell lines were established using RNA interference technology. The differentially expressed proteins in the two cell lines were globally analyzed through an isobaric tags for relative and absolute quantitation-based quantitative proteomics approach. Proteomic analysis revealed 255, 375, 362, and 5 differentially expressed proteins after 0, 0.5, 3, and 12 h of drug stimulation, respectively, between the two cell lines. The identified differentially expressed proteins were involved in numerous biological processes. In addition, the expression of histone proteins (H1.4, H2AX, H3.1, H3.2, and H3.3) was drastically altered, and the effects of XIAP silencing were accompanied by the marked downregulation of H2AX. Protein-protein interactions were assessed and confirmed through immunofluorescence and Western blot analyses.

resultsThe results suggested that XIAP may act as a vital cell signal regulator that regulates the expression of DNA repair-related proteins, such as H2AX, and influences the DNA repair process.

conclusionsGiven these functions, XIAP may be the decisive factor in determining the sensitivity of RCC cell apoptosis induction in response to chemotherapeutic agents.

Indexed as

ApoptosisCarcinoma, Renal CellCell Line, TumorEtoposideHistonesHumansKidney NeoplasmsProteomicsX-Linked Inhibitor of Apoptosis ProteinEtoposideH2AX protein, humanHistonesXIAP protein, humanX-Linked Inhibitor of Apoptosis Protein

Identifiers

PMID31855962
PMCPMC6964936
OpenAlexW2995735701

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.