Evidence map›Paper›PMID 31853722›Full record

ArticlePlanta2019

Regulation of color transition in purple tea (Camellia sinensis).

Manglesh Kumari, Shweta Thakur, Ajay Kumar, Robin Joshi, Prakash Kumar, Ravi Shankar, Rajiv Kumar

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Manglesh KumariDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Shweta ThakurDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Ajay KumarDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Robin JoshiDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Prakash KumarDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Ravi ShankarDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India.
Rajiv KumarDepartment of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176061, HP, India. rajiv@ihbt.res.in.ORCID http://orcid.org/0000-0002-2559-674X
Institute of Himalayan Bioresource Technology · IN

Funding

Council of Scientific and Industrial Research, India MLP-0201
6 · The paper itself

Abstract

MAIN

conclusionComparative proteomics and metabolomics study of juvenile green, light purple and dark purple leaf to identify key proteins and metabolites that putatively govern color transition in Camellia sinensis. Color transition from juvenile green to dark purple leaf in Camellia sinensis is a complex process and thought to be regulated by an intricate balance of genes, proteins and metabolites expression. A molecular-level understanding of proteins and metabolites expression is needed to define metabolic process underpinning color transition in C. sinensis. Here, purple leaf growth of C. sinensis cultivar was divided into three developmental stages viz. juvenile green (JG), light purple (LP) and dark purple (DP) leaf. Scanning electron microscope (SEM) analysis revealed a clear morphological variation such as cell size, shape and texture as tea leaf undergoing color transition. Proteomic and metabolomic analyses displayed the temporal changes in proteins and metabolites that occur in color transition process. In total, 211 differentially expressed proteins (DEPs) were identified presumably involved in secondary metabolic processes particularly, flavonoids/anthocyanin biosynthesis, phytohormone regulation, carbon and nitrogen assimilation and photosynthesis, among others. Subcellular localization of three candidate proteins was further evaluated by their transient expression in planta. Interactome study revealed that proteins involved in primary metabolism, precursor metabolite, photosynthesis, phytohormones, transcription factor and anthocyanin biosynthesis were found to be interact directly or indirectly and thus, regulate color transition from JG to DP leaf. The present study not only corroborated earlier findings but also identified novel proteins and metabolites that putatively govern color transition in C. sinensis. These findings provide a platform for future studies that may be utilized for metabolic engineering/molecular breeding in an effort to develop more desirable traits.

Indexed as

LightAnthocyaninsCamellia sinensisCarbonCell SizeChlorophyllColorFlavonoidsGene Expression Regulation, PlantMetabolic Networks and PathwaysMetabolomicsNitrogenPhotosynthesisPlant Growth RegulatorsPlant LeavesPlant ProteinsAnthocyaninsCarbonChlorophyllFlavonoidsNitrogenPlant Growth RegulatorsPlant ProteinsTeaTranscription FactorsLeafMetabolomicsProteomicsSecondary metabolism

Identifiers

PMID31853722
OpenAlexW2995917863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.