Evidence map›Paper›PMID 31853654›Full record

ArticleJournal of medical systems2019

Tumor Budding Detection System in Whole Slide Pathology Images.

Mohammad F A Fauzi, Wei Chen, Debbie Knight, Heather Hampel, Wendy L Frankel, Metin N Gurcan

Abstract read
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In one paragraph

Article in Journal of medical systems, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Few-shot Tumor Bud Segmentation Using Generative Model in Colorectal Carcinoma.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
  4. Adapting SAM to Histopathology Images for Tumor Bud Segmentation in Colorectal Cancer.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
  5. Predictive value of tumor budding in head and neck squamous cell carcinoma: an update.Virchows Archiv : an international journal of pathology · 2023
    Review
  6. Article
  7. Article
  8. Tumour budding in solid cancers.Nature reviews. Clinical oncology · 2021
    Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Mohammad F A FauziFaculty of Engineering, Multimedia University, 63100, Cyberjaya, SGR, Malaysia. faizal1@mmu.edu.my.ORCID http://orcid.org/0000-0001-5382-6269
Wei ChenDepartment of Pathology, The Ohio State University Wexner Medical Center, Columbus, OH, 43210, USA.
Debbie KnightDepartment of Pathology, The Ohio State University Wexner Medical Center, Columbus, OH, 43210, USA.
Heather HampelDepartment of Internal Medicine, Division of Human Genetics, The Ohio State University Wexner Medical Center, Columbus, OH, 43210, USA.
Wendy L FrankelDepartment of Pathology, The Ohio State University Wexner Medical Center, Columbus, OH, 43210, USA.
Metin N GurcanCenter for Biomedical Informatics, Wake Forest School of Medicine, Winston-Salem, NC, 27101, USA.
The Ohio State University Wexner Medical Center · USMultimedia University · MYWake Forest University · US

Funding

Fundamental Research Grant Scheme (FRGS) FRGS/1/2015/SKK13/MMU/02/1
6 · The paper itself

Abstract

Tumor budding is defined as the presence of single tumor cells or small tumor clusters (less than five cells) that 'bud' from the invasive front of the main tumor. Tumor budding (TB) has recently emerged as an important adverse prognostic factor for many different cancer types. In colorectal carcinoma (CRC), tumor budding has been independently associated with lymph node metastasis and poor outcome. Pathologic assessment of tumor budding by light microscopy requires close evaluation of tumor invasive front on intermediate to high power magnification, entailing locating the 'hotspot' of tumor budding, counting all TB in one high power field, and generating a tumor budding score. By automating these time-consuming tasks, computer-assisted image analysis tools can be helpful for daily pathology practice, since tumor budding reporting is now recommended on select cases. In this paper, we report our work on the development of a tumor budding detection system in CRC from whole-slide Cytokeratin AE1/3 images, based on de novo computer algorithm that automates morphometric analysis of tumor budding.

Indexed as

AlgorithmsColorectal NeoplasmsHumansImage Interpretation, Computer-AssistedIntestinal MucosaLymphatic MetastasisLymph NodesMicroscopyNeoplasm StagingPathology, SurgicalPrognosisColorectal cancerDigital pathologyTumor buddingTumor classification

Identifiers

PMID31853654
OpenAlexW2994996952

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.