Evidence map›Paper›PMID 31852976›Full record

ArticleScientific reports2019

PPIP5K2 and PCSK1 are Candidate Genetic Contributors to Familial Keratoconus.

Mariam Lofty Khaled, Yelena Bykhovskaya, Chunfang Gu, Alice Liu, Michelle D Drewry, Zhong Chen, Barbara A Mysona, Emily Parker, Ryan P McNabb, Hongfang Yu and 15 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Analysis of Keratoconus-Related Phenotypes in Two Pcsk1 Mouse Models.Translational vision science & technology · 2026
    Article
  6. Article
  7. IMPC impact on preclinical mouse models.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Systemic and Ocular Associations of Keratoconus.Expert review of ophthalmology · 2024
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 9 institutions in 4 countries.

Mariam Lofty KhaledDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Yelena BykhovskayaDepartment of Surgery and Regenerative Medicine Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Chunfang GuInositol Signaling Group, Signal Transduction Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA.
Alice LiuDepartment of Ophthalmology, Duke University Medical Center, Durham, NC, USA.
Michelle D DrewryDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Zhong ChenDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Barbara A MysonaDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Emily ParkerDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.ORCID http://orcid.org/0000-0002-0707-4876
Ryan P McNabbDepartment of Ophthalmology, Duke University Medical Center, Durham, NC, USA.ORCID http://orcid.org/0000-0002-1686-4191
Hongfang YuDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Xiaowen LuDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Jing WangDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Xiaohui LiInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute and Department of Pediatrics and Medicine at Harbor-UCLA, Torrance, CA, USA.
Abdulrahman Al-MuammarDepartment of Ophthalmology, Glaucoma Research Chair, King Saud University, Riyadh, Saudi Arabia.
Jerome I RotterInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute and Department of Pediatrics and Medicine at Harbor-UCLA, Torrance, CA, USA.ORCID http://orcid.org/0000-0001-7191-1723
Louise F PorterDepartment of Eye and Vision Science, University of Liverpool, and St Paul's Eye Unit, Royal Liverpool Hospital, Liverpool, UK.
Amy EstesJames and Jean Culver Vision Discovery Institute, Augusta University, Augusta, GA, USA.
Mitchell A WatskyDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Sylvia B SmithDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA.
Hongyan XuDepartment of Population Health Science, Augusta University, Augusta, GA, USA.
Khaled K Abu-AmeroDepartment of Ophthalmology, Glaucoma Research Chair, King Saud University, Riyadh, Saudi Arabia.
Anthony KuoDepartment of Ophthalmology, Duke University Medical Center, Durham, NC, USA.
Stephen B ShearsInositol Signaling Group, Signal Transduction Laboratory, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA.
Yaron S RabinowitzDepartment of Surgery and Regenerative Medicine Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA. yaron.rabinowitz@cshs.org.
Yutao LiuDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, GA, USA. yutliu@augusta.edu.ORCID http://orcid.org/0000-0003-2870-4504
Augusta University · USDuke Medical Center · USCedars-Sinai Medical Center · USKing Saud University · SANational Institute of Environmental Health Sciences · USThe Lundquist Institute · USAugusta University Health · USCairo University · EGUniversity of Liverpool · GB

Funding

VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
GENETIC FACTORS IN KERATOCONUSR01EY009052 · NEI · CEDARS-SINAI MEDICAL CENTER · PI RABINOWITZ, YARON SOLOMON, ROTTER, JEROME I · 1993 to 2019
$10.9M
Module 3: Gene Expression/ProteomicsP30EY031631 · NEI · AUGUSTA UNIVERSITY · PI Xingjun Fan · 2020 to 2026
$3.6M
Whole Eye Optical Coherence Tomography to Improve Refractive Surgery and Eye CareR01EY024312 · NEI · DUKE UNIVERSITY · PI KUO, ANTHONY NANLIN · 2015 to 2024
$3.5M
Gene Discovery in Familial KeratoconusR01EY023242 · NEI · DUKE UNIVERSITY · PI LIU, YUTAO · 2013 to 2023
$3.4M
Vitamin D Metabolism and Function in the Cornea and Anterior SegmentR01EY021747 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI WATSKY, MITCHELL A · 2012 to 2020
$3.1M
Sigma 1 Receptor: a novel therapeutic target for retinal degenerationR01EY028103 · NEI · AUGUSTA UNIVERSITY · PI SMITH, SYLVIA B. · 2017 to 2019
$1.2M
Portable motion-stabilized optical coherence tomography for eye care in acute care settingsR01EY029302 · NEI · DUKE UNIVERSITY · PI IZATT, JOSEPH A, KUO, ANTHONY NANLIN · 2018 to 2020
$1.1M
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
NEI NIH HHS P30 EY005722NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY009052NEI NIH HHS R01 EY021747NEI NIH HHS R01 EY023242NEI NIH HHS R01 EY024312NEI NIH HHS R01 EY028103NEI NIH HHS R01 EY029302NEI NIH HHS R21 EY028671U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) R01EY009052U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) R01EY024312U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) R01EY028103U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) R01EY029302
6 · The paper itself

Abstract

Keratoconus (KC) is the most common corneal ectatic disorder affecting >300,000 people in the US. KC normally has its onset in adolescence, progressively worsening through the third to fourth decades of life. KC patients report significant impaired vision-related quality of life. Genetic factors play an important role in KC pathogenesis. To identify novel genes in familial KC patients, we performed whole exome and genome sequencing in a four-generation family. We identified potential variants in the PPIP5K2 and PCSK1 genes. Using in vitro cellular model and in vivo gene-trap mouse model, we found critical evidence to support the role of PPIP5K2 in normal corneal function and KC pathogenesis. The gene-trap mouse showed irregular corneal surfaces and pathological corneal thinning resembling KC. For the first time, we have integrated corneal tomography and pachymetry mapping into characterization of mouse corneal phenotypes which could be widely implemented in basic and translational research for KC diagnosis and therapy in the future.

Indexed as

Genetic Predisposition to DiseaseAdultAnimalsChromosome MappingCorneaCorneal TopographyDisease Models, AnimalExome SequencingFemaleGenetic LinkageGenome, HumanGenotypeHumansKeratoconusMaleMicePCSK1 protein, humanPhosphotransferases (Phosphate Group Acceptor)PPIP5K2 protein, humanProprotein Convertase 1

Identifiers

PMID31852976
PMCPMC6920454
OpenAlexW2995830928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.