Evidence map›Paper›PMID 31852917›Full record

ArticleScientific reports2019

Ultrastructural modeling of small angle scattering from photosynthetic membranes.

Dainius Jakubauskas, Łucja Kowalewska, Anna V Sokolova, Christopher J Garvey, Kell Mortensen, Poul Erik Jensen, Jacob J K Kirkensgaard

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Journal of applied crystallography · 2025
    Article
  3. Article
  4. Journal of applied crystallography · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dainius JakubauskasNiels Bohr Institute, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Łucja KowalewskaDepartment of Plant Anatomy and Cytology, Institute of Experimental Plant Biology and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland.
Anna V SokolovaAustralian Centre for Neutron Scattering, ANSTO, NSW, 2234, Sydney, Australia.
Christopher J GarveyAustralian Centre for Neutron Scattering, ANSTO, NSW, 2234, Sydney, Australia.
Kell MortensenNiels Bohr Institute, University of Copenhagen, DK-2100, Copenhagen, Denmark.
Poul Erik JensenCopenhagen Plant Science Centre, Department of Plant and Environmental Sciences, University of Copenhagen, DK-1871, Copenhagen, Denmark.
Jacob J K KirkensgaardNiels Bohr Institute, University of Copenhagen, DK-2100, Copenhagen, Denmark. jjkk@food.ku.dk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The last decade has seen a range of studies using non-invasive neutron and X-ray techniques to probe the ultrastructure of a variety of photosynthetic membrane systems. A common denominator in this work is the lack of an explicitly formulated underlying structural model, ultimately leading to ambiguity in the data interpretation. Here we formulate and implement a full mathematical model of the scattering from a stacked double bilayer membrane system taking instrumental resolution and polydispersity into account. We validate our model by direct simulation of scattering patterns from 3D structural models. Most importantly, we demonstrate that the full scattering curves from three structurally typical cyanobacterial thylakoid membrane systems measured in vivo can all be described within this framework. The model provides realistic estimates of key structural parameters in the thylakoid membrane, in particular the overall stacking distance and how this is divided between membranes, lumen and cytoplasmic liquid. Finally, from fitted scattering length densities it becomes clear that the protein content in the inner lumen has to be lower than in the outer cytoplasmic liquid and we extract the first quantitative measure of the luminal protein content in a living cyanobacteria.

Indexed as

CyanobacteriaMolecular ConformationNeutron DiffractionNeutronsPhotosynthesisScattering, Small AngleThylakoids

Identifiers

PMID31852917
PMCPMC6920412

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.