Evidence map›Paper›PMID 31852841›Full record

ArticleJCI insight2019

Secretome profiling identifies neuron-derived neurotrophic factor as a tumor-suppressive factor in lung cancer.

Ya Zhang, Xuefeng Wu, Yan Kai, Chia-Han Lee, Fengdong Cheng, Yixuan Li, Yongbao Zhuang, Javid Ghaemmaghami, Kun-Han Chuang, Zhuo Liu and 10 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Bakuchicin alleviates ovalbumin-induced allergic asthma by regulating M2 macrophage polarization.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. The clinical and prognostic significance of CMTM6/PD-L1 in oncology.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Ya ZhangGW Cancer Center and.
Xuefeng WuGW Cancer Center and.
Yan KaiGW Cancer Center and.
Chia-Han LeeGW Cancer Center and.
Fengdong ChengGW Cancer Center and.
Yixuan LiGW Cancer Center and.
Yongbao ZhuangGW Cancer Center and.
Javid GhaemmaghamiGW Cancer Center and.
Kun-Han ChuangGW Cancer Center and.
Zhuo LiuGW Cancer Center and.
Yunxiao MengGW Cancer Center and.
Meghana KeswaniGW Cancer Center and.
Nancy R GoughCenter for Translational Medicine, Department of Surgery, George Washington University School of Medicine and Health Sciences, Washington, DC, USA.
Xiaojun WuDepartment of Pathology, Johns Hopkins Sibley Memorial Hospital, Washington, DC, USA.
Wenge ZhuGW Cancer Center and.
Alexandros TzatsosGW Cancer Center and.
Weiqun PengGW Cancer Center and.
Edward SetoGW Cancer Center and.
Eduardo M SotomayorGW Cancer Center and.
Xiaoyan ZhengGW Cancer Center and.
George Washington University · USJohns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical and preclinical studies show tissue-specific differences in tumorigenesis. Tissue specificity is controlled by differential gene expression. We prioritized genes that encode secreted proteins according to their preferential expression in normal lungs to identify candidates associated with lung cancer. Indeed, most of the lung-enriched genes identified in our analysis have known or suspected roles in lung cancer. We focused on the gene encoding neuron-derived neurotrophic factor (NDNF), which had not yet been associated with lung cancer. We determined that NDNF was preferentially expressed in the normal adult lung and that its expression was decreased in human lung adenocarcinoma and a mouse model of this cancer. Higher expression of NDNF was associated with better clinical outcome of patients with lung adenocarcinoma. Purified NDNF inhibited proliferation of lung cancer cells, whereas silencing NDNF promoted tumor cell growth in culture and in xenograft models. We determined that NDNF is downregulated through DNA hypermethylation near CpG island shores in human lung adenocarcinoma. Furthermore, the lung cancer-related DNA hypermethylation sites corresponded to the methylation sites that occurred in tissues with low NDNF expression. Thus, by analyzing the tissue-specific secretome, we identified a tumor-suppressive factor, NDNF, which is associated with patient outcomes in lung adenocarcinoma.

Indexed as

A549 CellsAdenocarcinoma of LungAgedAged, 80 and overAnimalsBiomarkers, TumorCarcinogenesisCell ProliferationCpG IslandsDatasets as TopicDNA MethylationDown-RegulationEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHEK293 CellsBiomarkers, TumorNDNF protein, humanNerve Growth FactorsTumor Suppressor ProteinsCell BiologyLung cancerTumor suppressors

Identifiers

PMID31852841
PMCPMC6975268
OpenAlexW2996023058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.