Evidence map›Paper›PMID 31852779›Full record

ArticleJournal of virology2020

Conformational Flexibility in Respiratory Syncytial Virus G Neutralizing Epitopes.

Stanislav O Fedechkin, Natasha L George, Ana M Nuñez Castrejon, Joshua R Dillen, Lawrence M Kauvar, Rebecca M DuBois

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stanislav O FedechkinDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, California, USA.
Natasha L GeorgeDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, California, USA.
Ana M Nuñez CastrejonDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, California, USA.
Joshua R DillenDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, California, USA.
Lawrence M KauvarTrellis Bioscience, LLC, Redwood City, California, USA.
Rebecca M DuBoisDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, California, USA rmdubois@ucsc.edu.ORCID 0000-0003-4185-5673
University of California, Santa Cruz · USTrellis Bioscience (United States) · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Therapeutic Antibody for RSV IIBR44AI122360 · NIAID · TRELLIS BIOSCIENCE, INC. · PI KAUVAR, LAWRENCE MICHAEL · 2016 to 2021
$5.8M
Eliminating Critical Systematic Errors In Structural Biology With Next-Generation SimulationR01GM124149 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HOLTON, JAMES M · 2017 to 2024
$2.5M
Structure-guided design of a safe and effective Respiratory Syncytial Virus G protein immunogenR56AI141537 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI DUBOIS, REBECCA MICHELLE, TRIPP, RALPH A · 2019 to 2019
$559k
Structural Requirements for Broadly Protecting Antibodies to the Respiratory Syncytial Virus G ProteinR21AI130605 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI DUBOIS, REBECCA MICHELLE · 2018 to 2019
$414k
NIAID NIH HHS R21 AI130605NIAID NIH HHS R44 AI122360NIAID NIH HHS R56 AI141537NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM124149
6 · The paper itself

Abstract

Respiratory syncytial virus (RSV) is a top cause of severe lower respiratory tract disease and mortality in infants and the elderly. Currently, no vaccine or effective treatment exists for RSV. The RSV G glycoprotein mediates viral attachment to cells and contributes to pathogenesis by modulating host immunity through interactions with the human chemokine receptor CX3CR1. Antibodies targeting the RSV G central conserved domain are protective in both prophylactic and postinfection animal models. Here, we describe the crystal structure of the broadly neutralizing human monoclonal antibody 3G12 bound to the RSV G central conserved domain. Antibody 3G12 binds to a conformational epitope composed of highly conserved residues, explaining its broad neutralization activity. Surprisingly, RSV G complexed with 3G12 adopts a distinct conformation not observed in previously described RSV G-antibody structures. Comparison to other structures reveals that the RSV G central conserved domain is flexible and can adopt multiple conformations in the regions flanking the cysteine noose. We also show that restriction of RSV G flexibility with a proline mutation abolishes binding to antibody 3G12 but not antibody 3D3, which recognizes a different conformation of RSV G. Our studies provide new insights for rational vaccine design, indicating the importance of preserving both the global structural integrity of antigens and local conformational flexibility at antigenic sites, which may elicit a more diverse antibody response and broader protection against infection and disease.

Indexed as

Antibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCrystallography, X-RayCX3C Chemokine Receptor 1EpitopesHumansModels, MolecularMutationProtein ConformationRespiratory Syncytial Virus, HumanViral Fusion ProteinsAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCX3C Chemokine Receptor 1CX3CR1 protein, humanEpitopesG glycoprotein, Respiratory syncytial virusViral Fusion Proteinsbroadly neutralizing antibodiesprotein structure-functionrespiratory syncytial virusX-ray crystallography

Identifiers

PMID31852779
PMCPMC7158734
OpenAlexW2995687198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.