Evidence map›Paper›PMID 31850615›Full record

ArticleChembiochem : a European journal of chemical biology2020

Proton-Detected Solid-State NMR of the Cell-Free Synthesized α-Helical Transmembrane Protein NS4B from Hepatitis C Virus.

Vlastimil Jirasko, Nils-Alexander Lakomek, Susanne Penzel, Marie-Laure Fogeron, Ralf Bartenschlager, Beat H Meier, Anja Böckmann

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Review
  3. Analysis of the structure and interactions of the SARS-CoV-2 ORF7b accessory protein.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  8. Chemical reviews · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vlastimil JiraskoETH Zürich, Physical Chemistry, Vladimir-Prelog Weg 2, 8093, Zürich, Switzerland.
Nils-Alexander LakomekETH Zürich, Physical Chemistry, Vladimir-Prelog Weg 2, 8093, Zürich, Switzerland.ORCID 0000-0002-4285-6339
Susanne PenzelETH Zürich, Physical Chemistry, Vladimir-Prelog Weg 2, 8093, Zürich, Switzerland.
Marie-Laure FogeronInstitut de Biologie et Chimie des Proteines, MMSB, Labex Ecofect, UMR 5086 CNRS, Université de Lyon, 7 passage du Vercors, 69367, Lyon, France.ORCID 0000-0002-2146-8740
Ralf BartenschlagerDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, Im Neuenheimer Feld 345, 69120, Heidelberg, Germany.ORCID 0000-0001-5601-9307
Beat H MeierETH Zürich, Physical Chemistry, Vladimir-Prelog Weg 2, 8093, Zürich, Switzerland.ORCID 0000-0002-9107-4464
Anja BöckmannInstitut de Biologie et Chimie des Proteines, MMSB, Labex Ecofect, UMR 5086 CNRS, Université de Lyon, 7 passage du Vercors, 69367, Lyon, France.ORCID 0000-0001-8149-7941

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proton-detected 100 kHz magic-angle-spinning (MAS) solid-state NMR is an emerging analysis method for proteins with only hundreds of microgram quantities, and thus allows structural investigation of eukaryotic membrane proteins. This is the case for the cell-free synthesized hepatitis C virus (HCV) nonstructural membrane protein 4B (NS4B). We demonstrate NS4B sample optimization using fast reconstitution schemes that enable lipid-environment screening directly by NMR. 2D spectra and relaxation properties guide the choice of the best sample preparation to record 2D

Indexed as

ProtonsAmino Acid SequenceHepacivirusLipidsProtein ConformationProtein Conformation, alpha-HelicalProton Magnetic Resonance SpectroscopyViral Nonstructural ProteinsLipidsNS4B protein, flavivirusProtonsViral Nonstructural Proteinscell-free protein synthesislipid reconstitutionproton detectionsolid-state NMRtransmembrane proteins

Identifiers

PMID31850615
PMCPMC7318649

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.