Evidence map›Paper›PMID 31848309›Full record

ArticlemSystems2019

Genomewide and Enzymatic Analysis Reveals Efficient d-Galacturonic Acid Metabolism in the Basidiomycete Yeast Rhodosporidium toruloides.

Ryan J Protzko, Christina A Hach, Samuel T Coradetti, Magdalena A Hackhofer, Sonja Magosch, Nils Thieme, Gina M Geiselman, Adam P Arkin, Jeffrey M Skerker, John E Dueber and 1 more

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Barcoded mutant library enables high-throughput functional genomics in a filamentous fungus.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. The genome-scale sugar metabolic model fromCurrent research in microbial sciences · 2026
    Article
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  9. Microbial valorization of underutilized and nonconventional waste streams.Journal of industrial microbiology & biotechnology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ryan J ProtzkoDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA.ORCID https://orcid.org/0000-0001-6128-8034
Christina A Hach *Holzforschung München, TUM School of Life Sciences Weihenstephan, Technische Universität München, Freising, Germany.ORCID https://orcid.org/0000-0002-9249-5279
Samuel T Coradetti *Energy Biosciences Institute, Berkeley, California, USA.ORCID https://orcid.org/0000-0003-0173-0403
Magdalena A Hackhofer *Holzforschung München, TUM School of Life Sciences Weihenstephan, Technische Universität München, Freising, Germany.
Sonja MagoschHolzforschung München, TUM School of Life Sciences Weihenstephan, Technische Universität München, Freising, Germany.
Nils ThiemeHolzforschung München, TUM School of Life Sciences Weihenstephan, Technische Universität München, Freising, Germany.ORCID https://orcid.org/0000-0003-3405-5563
Gina M GeiselmanEnergy Biosciences Institute, Berkeley, California, USA.
Adam P ArkinEnergy Biosciences Institute, Berkeley, California, USA.ORCID https://orcid.org/0000-0002-4999-2931
Jeffrey M SkerkerEnergy Biosciences Institute, Berkeley, California, USA.ORCID https://orcid.org/0000-0003-2653-1566
John E DueberEnergy Biosciences Institute, Berkeley, California, USA jdueber@berkeley.edu benz@hfm.tum.de.ORCID https://orcid.org/0000-0001-8404-7153
J Philipp BenzHolzforschung München, TUM School of Life Sciences Weihenstephan, Technische Universität München, Freising, Germany jdueber@berkeley.edu benz@hfm.tum.de.ORCID https://orcid.org/0000-0001-5361-4514
Lawrence Berkeley National Laboratory · USTechnical University of Munich · DEEnergy Biosciences Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biorefining of renewable feedstocks is one of the most promising routes to replace fossil-based products. Since many common fermentation hosts, such as

Indexed as

aerobic catabolismcarbon metabolismgalacturonic acidRhodosporidium toruloidesyeasts

Identifiers

PMID31848309
PMCPMC6918025
OpenAlexW2995068867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.