Evidence map›Paper›PMID 31848274›Full record

ArticlemBio2019

Mining the Methylome Reveals Extensive Diversity in Staphylococcus epidermidis Restriction Modification.

Jean Y H Lee, Glen P Carter, Sacha J Pidot, Romain Guérillot, Torsten Seemann, Anders Gonçalves da Silva, Timothy J Foster, Benjamin P Howden, Timothy P Stinear, Ian R Monk

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

  1. Genetic engineering ofMicrobial genomics · 2026
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  4. Detection ofApplied and environmental microbiology · 2025
    Article
  5. A low-cost and versatile paramagnetic bead DNA extraction method forApplied and environmental microbiology · 2024
    Article
  6. Phage SEP1 hijacksmSystems · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Characterization of theFrontiers in microbiology · 2023
    Article
  13. Review
  14. Role of RNAIII in Resistance to Antibiotics and Antimicrobial Agents inInternational journal of molecular sciences · 2022
    Article
  15. Comparative genomic analysis ofMicrobial genomics · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Jean Y H LeeDepartment of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia jean.lee@unimelb.edu.au ian.monk@unimelb.edu.au.ORCID 0000-0001-5751-8503
Glen P CarterDepartment of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.
Sacha J PidotDepartment of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.
Romain GuérillotDepartment of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.
Torsten SeemannDepartment of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.
Anders Gonçalves da SilvaMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.
Timothy J FosterMoyne Institute of Preventative Medicine, Department of Microbiology, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland.
Benjamin P Howden *Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.ORCID 0000-0003-0237-1473
Timothy P Stinear *Department of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia.ORCID 0000-0003-0150-123X
Ian R Monk *Department of Microbiology and Immunology, The University of Melbourne at The Doherty Institute for Infection and Immunity, Victoria, Australia jean.lee@unimelb.edu.au ian.monk@unimelb.edu.au.ORCID 0000-0001-6982-8074
The University of Melbourne · AUTrinity College Dublin · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Computational BiologyData MiningEpigenomeEpigenomicsGene Expression ProfilingChromosome MappingDeoxyribonucleases, Type I Site-SpecificDNA Transposable ElementsEvolution, MolecularHost-Pathogen InteractionsHumansPhylogenyPlasmidsStaphylococcus epidermidisStaphylococcus PhagesDeoxyribonucleases, Type I Site-SpecificDNA Transposable Elementscoagulase-negative staphylococciDNA methylationgeneralized transductiongenetic manipulationgenome analysisStaphylococcus aureustype I restriction modification

Identifiers

PMID31848274
PMCPMC6918075
OpenAlexW2996552947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.