Evidence map›Paper›PMID 31845481›Full record

ArticleEnvironmental microbiology reports2020

Flagellum expression and swimming activity by the zoonotic pathogen Escherichia albertii.

Koichi Murakami, Shinya Kimura, Osamu Nagafuchi, Tsuyoshi Sekizuka, Daisuke Onozuka, Fuminori Mizukoshi, Hiroyuki Tsukagoshi, Taisei Ishioka, Tetsuo Asai, Shinichiro Hirai and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Diversification ofFrontiers in microbiology · 2021
    Article
  6. EcoSal Plus · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 1 country.

Koichi MurakamiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, Musashi-Murayama, Tokyo, Japan.ORCID 0000-0001-8477-3091
Shinya KimuraGunma Prefectural Institute of Public Health and Environmental Sciences, Maebashi, Gunma, Japan.
Osamu NagafuchiFukuoka Institute of Technology, Fukuoka, Fukuoka, Japan.
Tsuyoshi SekizukaPathogen Genomics Center, National Institute of Infectious Diseases, Shinjuku, Tokyo, Japan.
Daisuke OnozukaDepartment of Preventive Medicine and Epidemiology, National Cerebral and Cardiovascular Center, Suita, Osaka, Japan.ORCID 0000-0001-9596-9188
Fuminori MizukoshiDepartment of Microbiology, Tochigi Prefectural Institute of Public Health and Environmental Science, Utsunomiya, Tochigi, Japan.
Hiroyuki TsukagoshiGunma Prefectural Institute of Public Health and Environmental Sciences, Maebashi, Gunma, Japan.
Taisei IshiokaTakasaki City Health Center, Takasaki, Gunma, Japan.
Tetsuo AsaiThe United Graduate School of Veterinary Sciences, Gifu University, Gifu, Japan.
Shinichiro HiraiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, Musashi-Murayama, Tokyo, Japan.
Manami MusashiAomori Prefectural Public Health and Environment Center, Aomori, Japan.
Motoi SuzukiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, Musashi-Murayama, Tokyo, Japan.
Makoto OhnishiDepartment of Bacteriology I, National Institute of Infectious Diseases, Shinjuku, Tokyo, Japan.
Kazunori OishiInfectious Disease Surveillance Center, National Institute of Infectious Diseases, Musashi-Murayama, Tokyo, Japan.
Nobuhiro SarukiGunma Prefectural Institute of Public Health and Environmental Sciences, Maebashi, Gunma, Japan.
Hirokazu KimuraGunma Paz University, Takasaki, Gunma, Japan.
Sunao IyodaDepartment of Bacteriology I, National Institute of Infectious Diseases, Shinjuku, Tokyo, Japan.
Makoto KurodaPathogen Genomics Center, National Institute of Infectious Diseases, Shinjuku, Tokyo, Japan.
Shuji FujimotoKyushu University, Fukuoka, Fukuoka, Japan.
National Institute of Infectious Diseases · JPGunma Prefectural Institute of Public Health and Environmental Sciences · JPAomori Public University · JPFukuoka Institute of Technology · JPGifu University · JPGumma Paz College · JPKyushu University · JPNational Cerebral and Cardiovascular Center · JPTakasaki City University of Economics · JPTochigi Prefectural Police · JP

Funding

the Institute for Fermentation 2016the Japan Agency for Medical Research and Development JP19fk0108033the Japan Agency for Medical Research and Development JP19fk0108065the Japan Agency for Medical Research and Development JP19fk0108103the Japanese Society for the Promotion of Science 19K10590the Toyo Suisan Foundation 2019
6 · The paper itself

Abstract

Flagella are the well-known structural appendages used by bacteria for motility. Although generally reported to be non-motile, the enteropathogenic bacterial species Escherichia albertii produces flagella intermittently. We found that E. albertii expressed flagella under specific environmental conditions. After several generations (involving 4 to 12-h incubations), six of the twelve strains we investigated displayed swimming motility in various aquatic environments, including pond water containing nutrients from pigeon droppings (10% suspension) as well as in 20 × -diluted tryptic soy broth. The most significant motility determinant was a temperature between 15 and 30 °C. At 20 °C in the 10% pigeon-dropping suspension, microscopic observations revealed that some cells (1%-95% of six strains) showed swimming motility. Electron microscopy showed that the E. albertii cells expressed flagella. Lower concentrations of some substrates (including nutrients) may be of secondary importance for E. albertii flagella expression. Interestingly, the non-motile strains (n = 6/12) contained pseudogenes corresponding to essential flagella structural proteins. After being released from its host into surface water, E. albertii may express flagella to move toward nutrient sources or new hosts.

Indexed as

AnimalsBacterial ZoonosesColumbidaeEscherichiaEscherichia coli ProteinsFecesFlagellaEscherichia coli Proteins

Identifiers

PMID31845481
PMCPMC7003939
OpenAlexW2995777915

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.