Evidence map›Paper›PMID 31844180›Full record

ArticleProstate cancer and prostatic diseases2020

Validation of a genomic classifier for prediction of metastasis and prostate cancer-specific mortality in African-American men following radical prostatectomy in an equal access healthcare setting.

Lauren E Howard, Jingbin Zhang, Nick Fishbane, Amanda M De Hoedt, Zachary Klaassen, Daniel E Spratt, Adriana C Vidal, Dechen Lin, Megan P Hitchins, Sungyong You and 4 more

Abstract readComparative StudyValidation Study
PubMed Publisher
In one paragraph

Article in Prostate cancer and prostatic diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Lauren E HowardDuke Cancer Institute, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0003-3355-4483
Jingbin ZhangDecipher Biosciences, Inc, Vancouver, BC, Canada.
Nick FishbaneDecipher Biosciences, Inc, Vancouver, BC, Canada.
Amanda M De HoedtDepartment of Surgery, Division of Urology, Veteran Affairs Healthcare System, Durham, NC, USA.
Zachary KlaassenDepartment of Surgery, Section of Urology, Augusta University - Medical College of Georgia, Augusta, GA, USA.
Daniel E SprattDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-5973-4741
Adriana C VidalDepartment of Surgery, Division of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Dechen LinDepartment of Medicine, Cedars-Sinai, Los Angeles, CA, USA.
Megan P HitchinsDepartment of Medicine, Cedars-Sinai, Los Angeles, CA, USA.
Sungyong YouDepartment of Surgery, Division of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-3513-1783
Michael R FreemanDepartment of Surgery, Division of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0001-8142-3432
Kosj YamoahSection of Genitourinary Radiation Oncology, Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Elai DavicioniDecipher Biosciences, Inc, Vancouver, BC, Canada.
Stephen J FreedlandDepartment of Surgery, Division of Urology, Veteran Affairs Healthcare System, Durham, NC, USA. stephen.freedland@cshs.org.
Cedars-Sinai Medical Center · USDecipher Biosciences (Canada) · CAAugusta University · USDuke University · USDurham VA Health Care System · USMoffitt Cancer Center · USUniversity of Michigan · US

Funding

Racial Differences in Prostate Cancer Molecular SubtypingR01CA220327 · NCI · CEDARS-SINAI MEDICAL CENTER · PI Stephen Jay Freedland, Michael R. Freeman · 2018 to 2026
$3.1M
6 · The paper itself

Abstract

backgroundThe Decipher 22-gene genomic classifier (GC) may help in post-radical prostatectomy (RP) decision making given its superior prognostic performance over clinicopathologic variables alone. However, most studies evaluating the GC have had a modest representation of African-American men (AAM). We evaluated the GC within a large Veteran Affairs cohort and compared its performance to CAPRA-S for predicting outcomes in AAM and non-AAM after RP.

methodsGC scores were generated for 548 prostate cancer (PC) patients, who underwent RP at the Durham Veteran Affairs Medical Center between 1989 and 2016. This was a clinically high-risk cohort and was selected to have either pT3a, positive margins, seminal vesicle invasion, or received post-RP radiotherapy. Multivariable Cox models and survival C-indices were used to compare the performance of GC and CAPRA-S for predicting the risk of metastasis and PC-specific mortality (PCSM).

resultsMedian follow-up was 9 years, during which 37 developed metastasis and 20 died from PC. Overall, 55% (n = 301) of patients were AAM. In multivariable analyses, GC (high vs. intermediate and intermediate vs. low) was a significant predictor of metastasis in all men (all p < 0.001). Consistent with prior studies, relative to CAPRA-S, GC had a higher C-index for 5-year metastasis (0.78 vs. 0.72) and 10-year PCSM (0.85 vs. 0.81). There was a suggestion GC was a stronger predictor in AAM than non-AAM. Specifically, the 5-year metastasis risk C-index was 0.86 in AAM vs. 0.69 in non-AAM and the 10-year PCSM risk C-index was 0.91 in AAM vs. 0.78 in non-AAM. However, the test for interaction of race and the performance of the GC in the Cox model was not significant for either metastasis or PCSM (both p ≥ 0.3).

conclusionsGC was a very strong predictor of poor outcome and performed well in both AAM and non-AAM. Our data support the use of GC for risk stratification in AAM post-RP. While our data suggest that GC may actually work better in AAM, given the limited number of events, further validation is needed.

Indexed as

Models, GeneticProstatectomyAgedBiomarkers, TumorBiopsyBlack or African AmericanFollow-Up StudiesGenomicsHospitals, VeteransHumansMaleMiddle AgedNeoplasm StagingPredictive Value of TestsPrognosisProstateBiomarkers, Tumor

Identifiers

PMID31844180
OpenAlexW2995508660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.