Evidence map›Paper›PMID 31842790›Full record

ArticleBMC medical genetics2019

LRCH1 polymorphisms linked to delayed encephalopathy after acute carbon monoxide poisoning identified by GWAS analysis followed by Sequenom MassARRAY® validation.

Jiapeng Gu, Jiao Zeng, Xi Wang, Xin Gu, Xiaoli Zhang, Ping Zhang, Fan Zhang, Yongkai Han, Yazhou Han, Hongxing Zhang and 2 more

Open access · goldAbstract readValidation Study
In one paragraph

Article in BMC medical genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Structure and Emerging Functions of LRCH Proteins in Leukocyte Biology.Frontiers in cell and developmental biology · 2020
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Jiapeng GuHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Jiao ZengHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Xi WangHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Xin GuHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Xiaoli ZhangHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Ping ZhangHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Fan ZhangHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Yongkai HanHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China.
Yazhou HanQinyang People's Hospital, Jiaozuo City, 454550, Henan Province, China.
Hongxing ZhangThe Psychology College of Xinxiang Medical University, Xinxiang City, 453002, Henan Province, China.
Wenqiang LiInternational Joint Research Laboratory for Psychiatry and Neuroscience of Henan, Henan Key Lab of Biological Psychiatry of Xinxiang Medical University, Xinxiang City, 453002, Henan Province, China. lwq781603@163.com.
Renjun GuHenan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, No. 388 Jianshe Middle Road, Muye District, Xinxiang City, 453002, Henan Province, China. gurenjun1961@163.com.ORCID 0000-0002-0490-7078
Henan Psychiatric Hospital · CNXinxiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe explored the association of leucine-rich repeats and calponin homology domain containing 1 (LRCH1) gene polymorphisms with genetic susceptibility to delayed encephalopathy after acute carbon monoxide poisoning (DEACMP), which might provide a theoretical basis for the pathogenesis, diagnosis, and prognosis research of DEACMP.

methodsFour single nucleotide polymorphisms, rs1539177 (G/A), rs17068697 (G/A), rs9534475 (A/C), and rs2236592 (T/C), of LRCH1, selected as candidate genes through genome-wide association analysis, were genotyped in 661 patients (DEACMP group: 235 cases; ACMP group: 426 cases) using Sequenom Massarray®. The association analysis of four SNPs and LRCH1 was performed under different genetic models.

resultsLRCH1 polymorphisms (rs1539177, rs17068697, rs9534475) under additive and dominant genetic models were significantly associated with an increased risk of DEACMP, but no significant association under allele and recessive models was found. The LRCH1 rs2236592 polymorphism was susceptible to DEACMP only under the dominant model (TT/TC + CC, OR = 1.616, 95% CI: 1.092-2.390, P = 0.015784). In addition, the A allele gene of rs9534475 polymorphism in LRCH1 might increase the risk for DEACMP (OR = 1.273, 95% CI: 1.013-1.601, P = 0.038445).

conclusionsWe found a significant association between the four LRCH1 polymorphisms and DEACMP. The allelic A of rs9534475 polymorphism in LRCH1 might be a risk factor for DEACMP.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyPolymorphism, Single NucleotideAcute DiseaseAgedAllelesBrain DiseasesCarbon Monoxide PoisoningFemaleHumansMaleMicrofilament ProteinsMiddle AgedLRCH1 protein, humanMicrofilament ProteinsACMPDEACMPGenetic modelLRCH1 polymorphismsSNP genotyping

Identifiers

PMID31842790
PMCPMC6916040
OpenAlexW2996389714

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.