Evidence map›Paper›PMID 31841587›Full record

ArticleThe Journal of general physiology2020

Insights into channel modulation mechanism of RYR1 mutants using Ca2+ imaging and molecular dynamics.

Toshiko Yamazawa, Haruo Ogawa, Takashi Murayama, Maki Yamaguchi, Hideto Oyamada, Junji Suzuki, Nagomi Kurebayashi, Kazunori Kanemaru, Katsuji Oguchi, Takashi Sakurai and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Advances in malignant hyperthermia: novel insights into heat-induced CaJournal of smooth muscle research = Nihon Heikatsukin Gakkai kikanshi · 2025
    Review
  2. Article
  3. Review
  4. Article
  5. Heat-hypersensitive mutants of ryanodine receptor type 1 revealed by microscopic heating.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Regulatory mechanisms of ryanodine receptor/CaJournal of muscle research and cell motility · 2021
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Toshiko Yamazawa *Department of Molecular Physiology, The Jikei University School of Medicine, Tokyo, Japan.
Haruo Ogawa *Institute for Quantitative Biosciences, The University of Tokyo, Tokyo, Japan.
Takashi MurayamaDepartment of Pharmacology, Juntendo University School of Medicine, Tokyo, Japan.
Maki YamaguchiDepartment of Molecular Physiology, The Jikei University School of Medicine, Tokyo, Japan.
Hideto OyamadaDepartment of Pharmacology, School of Medicine, Showa University, Tokyo, Japan.
Junji SuzukiDepartment of Pharmacology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Nagomi KurebayashiDepartment of Pharmacology, Juntendo University School of Medicine, Tokyo, Japan.
Kazunori KanemaruDepartment of Pharmacology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Katsuji OguchiDepartment of Pharmacology, School of Medicine, Showa University, Tokyo, Japan.
Takashi SakuraiDepartment of Pharmacology, Juntendo University School of Medicine, Tokyo, Japan.
Masamitsu IinoDepartment of Pharmacology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Juntendo University · JPJikei University School of Medicine · JPNihon University · JPShowa University · JPThe University of Tokyo · JPUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type 1 ryanodine receptor (RYR1) is a Ca2+ release channel in the sarcoplasmic reticulum in skeletal muscle and plays an important role in excitation-contraction coupling. Mutations in the RYR1 gene cause severe muscle diseases such as malignant hyperthermia (MH), which is a disorder of CICR via RYR1. Thus far, >300 mutations in RYR1 have been reported in patients with MH. However, owing to a lack of comprehensive analysis of the structure-function relationship of mutant RYR1, the mechanism remains largely unknown. Here, we combined functional studies and molecular dynamics (MD) simulations of RYR1 bearing disease-associated mutations at the N-terminal region. When expressed in HEK293 cells, the mutant RYR1 caused abnormalities in Ca2+ homeostasis. MD simulations of WT and mutant RYR1s were performed using crystal structure of the N-terminal domain (NTD) monomer, consisting of A, B, and C domains. We found that the mutations located around the interdomain region differentially affected hydrogen bonds/salt bridges. Particularly, mutations at R402, which increase the open probability of the channel, cause clockwise rotation of BC domains with respect to the A domain by alteration of the interdomain interactions. Similar results were also obtained with artificial mutations that mimic alteration of the interactions. Our results reveal the importance of interdomain interactions within the NTD in the regulation of the RYR1 channel and provide insights into the mechanism of MH caused by the mutations at the NTD.

Indexed as

Molecular Dynamics SimulationMutationCalciumHEK293 CellsHumansIon Channel GatingMalignant HyperthermiaProtein DomainsRyanodine Receptor Calcium Release ChannelCalciumRyanodine Receptor Calcium Release ChannelRYR1 protein, human

Identifiers

PMID31841587
PMCPMC7034096
OpenAlexW2996428271

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.