Evidence map›Paper›PMID 31841569›Full record

ArticlePLoS pathogens2019

Linking the effects of helminth infection, diet and the gut microbiota with human whole-blood signatures.

Soo Ching Lee, Mei San Tang, Alice V Easton, Joseph Cooper Devlin, Ling Ling Chua, Ilseung Cho, Foong Ming Moy, Tsung Fei Khang, Yvonne A L Lim, P'ng Loke

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 3 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 3 syntheses or guidelines pooled it, 34 citations in OpenAlex.

  1. Pooled it
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  8. Iron and the immune system.Nature reviews. Immunology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Soo Ching LeeDepartment of Parasitology, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.
Mei San TangDepartment of Microbiology, New York University School of Medicine, New York, New York, United States of America.
Alice V EastonDepartment of Microbiology, New York University School of Medicine, New York, New York, United States of America.ORCID 0000-0002-4476-9415
Joseph Cooper DevlinDepartment of Microbiology, New York University School of Medicine, New York, New York, United States of America.
Ling Ling ChuaDepartment of Obstetrics and Gynecology, Faculty of Medicine, University of Malaya Medical Centre, Kuala Lumpur, Malaysia.ORCID 0000-0002-1315-9489
Ilseung ChoDepartment of Medicine, Division of Gastroenterology, New York University School of Medicine, New York, New York, United States of America.ORCID 0000-0002-7308-8707
Foong Ming MoyDepartment of Social and Preventive Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.ORCID 0000-0002-0306-4419
Tsung Fei KhangUniversity of Malaya Centre for Data Analytics, University of Malaya, Kuala Lumpur, Malaysia.ORCID 0000-0003-4433-9738
Yvonne A L LimDepartment of Parasitology, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia.
P'ng LokeDepartment of Microbiology, New York University School of Medicine, New York, New York, United States of America.
New York University · USUniversity of Malaya · MYUniversity Malaya Medical Centre · MY

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Training Program in Immunology and Inflammation.T32AI100853 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Susan Ruth Schwab · 2012 to 2026
$4.5M
Regulation of vitamin A metabolism during Schistosoma mansoni infectionR01AI093811 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LOKE, PNG · 2011 to 2016
$2.4M
Role of Nod2 in preventing intestinal disease downstream of microbial imbalancesR01DK103788 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CADWELL, KEN HASHIGIWA, LOKE, PNG · 2015 to 2017
$1.3M
Recruitment of CX3CR1-GFP+ monocytes during Schistosoma mansoni infection.R21AI094166 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LOKE, PNG · 2011 to 2014
$586k
NCI NIH HHS P30 CA016087NIAID NIH HHS R01 AI093811NIAID NIH HHS R21 AI094166NIAID NIH HHS T32 AI100853NIDDK NIH HHS R01 DK103788
6 · The paper itself

Abstract

Helminth infection and dietary intake can affect the intestinal microbiota, as well as the immune system. Here we analyzed the relationship between fecal microbiota and blood profiles of indigenous Malaysians, referred to locally as Orang Asli, in comparison to urban participants from the capital city of Malaysia, Kuala Lumpur. We found that helminth infections had a larger effect on gut microbial composition than did dietary intake or blood profiles. Trichuris trichiura infection intensity also had the strongest association with blood transcriptional profiles. By characterizing paired longitudinal samples collected before and after deworming treatment, we determined that changes in serum zinc and iron levels among the Orang Asli were driven by changes in helminth infection status, independent of dietary metal intake. Serum zinc and iron levels were associated with changes in the abundance of several microbial taxa. Hence, there is considerable interplay between helminths, micronutrients and the microbiota on the regulation of immune responses in humans.

Indexed as

DietGastrointestinal MicrobiomeHelminthiasisHost-Parasite InteractionsHumansIronMalaysiaRNAZincIronRNAZinc

Identifiers

PMID31841569
PMCPMC6913942
OpenAlexW2996696839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.