Evidence map›Paper›PMID 31841113›Full record

ArticleeLife2019

Tissue-specific shaping of the TCR repertoire and antigen specificity of iNKT cells.

Rebeca Jimeno, Marta Lebrusant-Fernandez, Christian Margreitter, Beth Lucas, Natacha Veerapen, Gavin Kelly, Gurdyal S Besra, Franca Fraternali, Jo Spencer, Graham Anderson and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Dendritic Cell-Based Immunotherapy in Patients With Resected Pancreatic Cancer.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2024
    Trial
  2. Article
  3. Article
  4. The immune response to human cytomegalovirus: impact of age, co-morbidities and the significance of anti-viral activity assessment.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  5. Article
  6. Article
  7. Tissue determinants of the human T cell receptor repertoire.bioRxiv : the preprint server for biology · 2024
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Development of αβ T Cells with Innate Functions.Advances in experimental medicine and biology · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Rebeca JimenoThe Peter Gorer Department of Immunobiology, King's College London, London, United Kingdom.
Marta Lebrusant-FernandezThe Peter Gorer Department of Immunobiology, King's College London, London, United Kingdom.
Christian MargreitterRandall Centre for Cell & Molecular Biophysics, King's College London, London, United Kingdom.
Beth LucasInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham, United Kingdom.
Natacha VeerapenInstitute of Microbiology and Infection, University of Birmingham, Birmingham, United Kingdom.
Gavin KellyBioinformatics and Biostatistics Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Gurdyal S BesraInstitute of Microbiology and Infection, University of Birmingham, Birmingham, United Kingdom.
Franca FraternaliRandall Centre for Cell & Molecular Biophysics, King's College London, London, United Kingdom.ORCID http://orcid.org/0000-0002-3143-6574
Jo SpencerThe Peter Gorer Department of Immunobiology, King's College London, London, United Kingdom.
Graham AndersonInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham, United Kingdom.
Patricia BarralThe Peter Gorer Department of Immunobiology, King's College London, London, United Kingdom.ORCID https://orcid.org/0000-0003-4324-8973
King's College London · GBUniversity of Birmingham · GBThe Francis Crick Institute · GB

Funding

H2020 Marie Skłodowska-Curie Actions Marie Curie Intraeuropean Fellowship (H2020-MSCA-IF-2015-703639)Marie Curie Intraeuropean Fellowship H2020-MSCA-IF-2015-703639Medical Research Council DKAA.RRAK18742Medical Research Council G0400421Medical Research Council G1001750Medical Research Council MR/L008157/1Wellcome Trust
6 · The paper itself

Abstract

Tissue homeostasis is critically dependent on the function of tissue-resident lymphocytes, including lipid-reactive invariant natural killer T (iNKT) cells. Yet, if and how the tissue environment shapes the antigen specificity of iNKT cells remains unknown. By analysing iNKT cells from lymphoid tissues of mice and humans we demonstrate that their T cell receptor (TCR) repertoire is highly diverse and is distinct for cells from various tissues resulting in differential lipid-antigen recognition. Within peripheral tissues iNKT cell recent thymic emigrants exhibit a different TCR repertoire than mature cells, suggesting that the iNKT population is shaped after arrival to the periphery. Consistent with this, iNKT cells from different organs show distinct basal activation, proliferation and clonal expansion. Moreover, the iNKT cell TCR repertoire changes following immunisation and is shaped by age and environmental changes. Thus, post-thymic modification of the TCR-repertoire underpins the distinct antigen specificity for iNKT cells in peripheral tissues.

Indexed as

AnimalsAntigensCell ProliferationHumansLipidsMiceNatural Killer T-CellsReceptors, Antigen, T-CellSubstrate SpecificityAntigensLipidsReceptors, Antigen, T-Cellhumanimmunologyinflammationlipid antigenmouseNKT cellTCR

Identifiers

PMID31841113
PMCPMC6930077
OpenAlexW2995521810

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.