Evidence map›Paper›PMID 31839537›Full record

ArticleDevelopmental cell2020

GCNA Preserves Genome Integrity and Fertility Across Species.

Varsha Bhargava, Courtney D Goldstein, Logan Russell, Lin Xu, Murtaza Ahmed, Wei Li, Amanda Casey, Kelly Servage, Rahul Kollipara, Zachary Picciarelli and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 71 citations in OpenAlex.

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  15. Zebrafish as a model system for studying reproductive diseases.Frontiers in cell and developmental biology · 2024
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Varsha BhargavaDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Courtney D GoldsteinDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Logan RussellMagee-Womens Research Institute, Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, PA 15213, USA.
Lin XuQuantitative Biomedical Research Center, Department of Population and Data Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Murtaza AhmedDepartment of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Wei LiMagee-Womens Research Institute, Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, PA 15213, USA; Tsinghua University MD Program, School of Medicine, Tsinghua University, Haidian District, Beijing 100084, PR China.
Amanda CaseyDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Kelly ServageDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Howard Hughes Medical Institute, 6000 Harry Hines Boulevard NA5.120F, Dallas, TX 75235, USA.
Rahul KolliparaMcDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Zachary PicciarelliMagee-Womens Research Institute, Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, PA 15213, USA.
Ralf KittlerMcDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Alexander YatsenkoMagee-Womens Research Institute, Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, PA 15213, USA.
Michelle CarmellCold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA; RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA; Department of Biological Sciences, Wellesley College, Wellesley, MA 02481, USA.
Kim OrthDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Howard Hughes Medical Institute, 6000 Harry Hines Boulevard NA5.120F, Dallas, TX 75235, USA.
James F AmatrudaDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: jamatruda@chla.usc.edu.
Judith L YanowitzMagee-Womens Research Institute, Department of Obstetrics, Gynecology, and Reproductive Sciences, University of Pittsburgh School of Medicine, PA 15213, USA. Electronic address: yanowitzjl@mwri.magee.edu.
Michael BuszczakDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Center for Regenerative Science and Medicine, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: michael.buszczak@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USMagee-Womens Research Institute · USSouthwestern Medical Center · USUniversity of Pittsburgh · USHoward Hughes Medical Institute · USTsinghua University · CNUniversity of Massachusetts Chan Medical School · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
Project IIIP50HD096723 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DONALD F. CONRAD · 2019 to 2026
$15.0M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
DIVISION OF CELL &MOLECULAR BIOLOGY TRAINING PROGRAMT32GM008203 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI COBB, MELANIE H. · 1987 to 2018
$7.0M
Understanding the architecture, regulation, and function of piRNA-producing genesP01HD078253 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI THEURKAUF, WILLIAM EDWARD · 2015 to 2019
$6.5M
RNA MEDIATED GENETIC INTERFERENCE IN C ELEGANSR01GM058800 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C · 1999 to 2014
$4.6M
RNA Mediated Genetic Interference in C. elegansR37GM058800 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C · 2015 to 2024
$3.7M
Undergraduate Summer Research Supplement for 5R01GM104007-07: Characterization of a Meiotic Crossover Surveillance SystemR01GM104007 · NIGMS · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI YANOWITZ, JUDITH L · 2013 to 2021
$2.6M
CELL POLARITY SIGNALING IN C ELEGANS EMBRYOSR01HD036247 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MELLO, CRAIG C · 1999 to 2008
$2.2M
Role of GCNA in preserving genome integrity and fertilityR01GM127569 · NIGMS · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI BUSZCZAK, MICHAEL, YANOWITZ, JUDITH L · 2019 to 2022
$2.0M
Systematic Characterization of an Aging Stem Cell NicheR01AG047318 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI BUSZCZAK, MICHAEL · 2015 to 2019
$1.7M
Decoding Stem Cell Chromatin Using DrosophilaR01GM086647 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI BUSZCZAK, MICHAEL · 2009 to 2013
$1.5M
NCI NIH HHS R13 CA117393NCRR NIH HHS P41 RR011823NIA NIH HHS R01 AG047318NICHD NIH HHS F32 HD008715NICHD NIH HHS P01 HD078253NICHD NIH HHS P50 HD096723NICHD NIH HHS R01 HD036247NIGMS NIH HHS R01 GM058800NIGMS NIH HHS R01 GM086647NIGMS NIH HHS R01 GM104007NIGMS NIH HHS R01 GM125812NIGMS NIH HHS R01 GM127569NIGMS NIH HHS R37 GM058800NIGMS NIH HHS T32 GM008203NIH HHS P40 OD010440NIH HHS S10 OD020103
6 · The paper itself

Abstract

The propagation of species depends on the ability of germ cells to protect their genome from numerous exogenous and endogenous threats. While these cells employ ubiquitous repair pathways, specialized mechanisms that ensure high-fidelity replication, chromosome segregation, and repair of germ cell genomes remain incompletely understood. We identified Germ Cell Nuclear Acidic Peptidase (GCNA) as a conserved regulator of genome stability in flies, worms, zebrafish, and human germ cell tumors. GCNA contains an acidic intrinsically disordered region (IDR) and a protease-like SprT domain. In addition to chromosomal instability and replication stress, Gcna mutants accumulate DNA-protein crosslinks (DPCs). GCNA acts in parallel with the SprT domain protein Spartan. Structural analysis reveals that while the SprT domain is needed to limit DNA damage, the IDR imparts significant function. This work shows that GCNA protects germ cells from various sources of damage, providing insights into conserved mechanisms that promote genome integrity across generations.

Indexed as

DNA DamageDNA RepairDNA ReplicationFertilityGenomic InstabilityAnimalsCaenorhabditis elegansDNA Copy Number VariationsDrosophila melanogasterFemaleGenomeGerm CellsHumansMaleNeoplasms, Germ Cell and EmbryonalNuclear ProteinsNuclear ProteinsPeptide Hydrolasesacidic repeat containingACRCchromosome instabilitychromosome segregationDNA-protein crosslinkDNA repairgerm cellintrinsically disordered regionSprT domaintransgenerational inheritance

Identifiers

PMID31839537
PMCPMC6946843
OpenAlexW2994811156

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.