Evidence map›Paper›PMID 31839260›Full record

ArticleBiophysical journal2020

Modulation of Structural Heterogeneity Controls Phytochrome Photoswitching.

Emil Gustavsson, Linnéa Isaksson, Cecilia Persson, Maxim Mayzel, Ulrika Brath, Lidija Vrhovac, Janne A Ihalainen, B Göran Karlsson, Vladislav Orekhov, Sebastian Westenhoff

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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  4. The structural effect between the output module and chromophore-binding domain is a two-way street via the hairpin extension.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  5. Light- and pH-dependent structural changes in cyanobacteriochrome AnPixJg2.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Emil GustavssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Linnéa IsakssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Cecilia PerssonSwedish NMR center, University of Gothenburg, Gothenburg, Sweden.
Maxim MayzelSwedish NMR center, University of Gothenburg, Gothenburg, Sweden.
Ulrika BrathSwedish NMR center, University of Gothenburg, Gothenburg, Sweden.
Lidija VrhovacDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.
Janne A IhalainenDepartment of Biological and Environmental Science, Nanoscience Center, University of Jyväskylä, Jyväskylä, Finland.
B Göran KarlssonDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden; Swedish NMR center, University of Gothenburg, Gothenburg, Sweden.
Vladislav OrekhovDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden; Swedish NMR center, University of Gothenburg, Gothenburg, Sweden.
Sebastian WestenhoffDepartment of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden. Electronic address: westenho@chem.gu.se.
University of Gothenburg · SEUniversity of Jyväskylä · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytochromes sense red/far-red light and control many biological processes in plants, fungi, and bacteria. Although the crystal structures of dark- and light-adapted states have been determined, the molecular mechanisms underlying photoactivation remain elusive. Here, we demonstrate that the conserved tongue region of the PHY domain of a 57-kDa photosensory module of Deinococcus radiodurans phytochrome changes from a structurally heterogeneous dark state to an ordered, light-activated state. The results were obtained in solution by utilizing a laser-triggered activation approach detected on the atomic level with high-resolution protein NMR spectroscopy. The data suggest that photosignaling of phytochromes relies on careful modulation of structural heterogeneity of the PHY tongue.

Indexed as

LightDarknessDeinococcusModels, MolecularNuclear Magnetic Resonance, BiomolecularPhytochromeProtein DomainsPhytochrome

Identifiers

PMID31839260
PMCPMC6976809
OpenAlexW2991544268

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.