Evidence map›Paper›PMID 31839203›Full record

ArticleAmerican journal of human genetics2020

Gain-of-Function MN1 Truncation Variants Cause a Recognizable Syndrome with Craniofacial and Brain Abnormalities.

Noriko Miyake, Hidehisa Takahashi, Kazuyuki Nakamura, Bertrand Isidor, Yoko Hiraki, Eriko Koshimizu, Masaaki Shiina, Kazunori Sasaki, Hidefumi Suzuki, Ryota Abe and 13 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 40 citations in OpenAlex.

  1. Iterative genetic testing identifiesJournal of human immunity · 2026
    Article
  2. Article
  3. Article
  4. Evolution of the essential geneProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Comprehensive summary: the role of PBX1 in development and cancers.Frontiers in cell and developmental biology · 2024
    Review
  15. Article
  16. A Novel Pathogenic Variant in theJournal of pediatric genetics · 2023
    Article
  17. Article
  18. Article
  19. Diagnosis and treatment of MN1 C-terminal truncation syndrome.Molecular genetics & genomic medicine · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 2 countries.

Noriko MiyakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan. Electronic address: nmiyake@yokohama-cu.ac.jp.
Hidehisa TakahashiDepartment of Molecular Biology, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Kazuyuki NakamuraDepartment of Pediatrics, Yamagata University Faculty of Medicine, Yamagata 990-9585, Japan.
Bertrand IsidorService de Génétique Médicale, Centre Hospitalier Universitaire de Nantes, 44093 Nantes, France.
Yoko HirakiHiroshima Municipal Center for Child Health and Development, Hiroshima 732-0052, Japan.
Eriko KoshimizuDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Masaaki ShiinaDepartment of Biochemistry, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Kazunori SasakiDepartment of Molecular Biology, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Hidefumi SuzukiDepartment of Molecular Biology, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Ryota AbeDepartment of Molecular Biology, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Yayoi KimuraAdvanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan.
Tomoko AkiyamaAdvanced Medical Research Center, Yokohama City University, Yokohama 236-0004, Japan.
Shin-Ichi TomizawaDepartment of Histology and Cell Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Tomonori HiroseDepartment of Molecular Biology, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Kohei HamanakaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Satoko MiyatakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan; Clinical Genetics Department, Yokohama City University Hospital, Yokohama, 236-0004, Japan.
Satomi MitsuhashiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Takeshi MizuguchiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Atsushi TakataDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan.
Kazuyuki OboDepartment of Histology and Cell Biology, Yokohama City University School of Medicine, Yokohama 236-0004, Japan.
Mitsuhiro KatoDepartment of Pediatrics, Yamagata University Faculty of Medicine, Yamagata 990-9585, Japan; Department of Pediatrics, Showa University School of Medicine, Tokyo 142-8666, Japan.
Kazuhiro OgataDepartment of Biochemistry, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan. Electronic address: naomat@yokohama-cu.ac.jp.
Yokohama City University · JPCentre Hospitalier Universitaire de Nantes · FRShowa University · JPYamagata University · JPYokohama City University Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MN1 was originally identified as a tumor-suppressor gene. Knockout mouse studies have suggested that Mn1 is associated with craniofacial development. However, no MN1-related phenotypes have been established in humans. Here, we report on three individuals who have de novo MN1 variants that lead to a protein lacking the carboxyl (C) terminus and who presented with severe developmental delay, craniofacial abnormalities with specific facial features, and structural abnormalities in the brain. An in vitro study revealed that the deletion of the C-terminal region led to increased protein stability, an inhibitory effect on cell proliferation, and enhanced MN1 aggregation in nuclei compared to what occurred in the wild type, suggesting that a gain-of-function mechanism is involved in this disease. Considering that C-terminal deletion increases the fraction of intrinsically disordered regions of MN1, it is possible that altered phase separation could be involved in the mechanism underlying the disease. Our data indicate that MN1 participates in transcriptional regulation of target genes through interaction with the transcription factors PBX1, PKNOX1, and ZBTB24 and that mutant MN1 impairs the binding with ZBTB24 and RING1, which is an E3 ubiquitin ligase. On the basis of our findings, we propose the model that C-terminal deletion interferes with MN1's interaction molecules related to the ubiquitin-mediated proteasome pathway, including RING1, and increases the amount of the mutant protein; this increase leads to the dysregulation of MN1 target genes by inhibiting rapid MN1 protein turnover.

Indexed as

Gain of Function MutationGene Expression RegulationSequence DeletionAdolescentBrain DiseasesCell ProliferationChildChild, PreschoolCraniofacial AbnormalitiesFemaleHeLa CellsHumansMaleProteolysisSyndromeTrans-ActivatorsMN1 protein, humanTrans-ActivatorsTumor Suppressor Proteinsbrain structural abnormalitiescraniofacial abnormalitiesgain-of-functionintrinsically disordered regionMN1phase separationtranscriptional regulation

Identifiers

PMID31839203
PMCPMC7042485
OpenAlexW2995263698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.