Evidence map›Paper›PMID 31838722›Full record

ArticleJournal of molecular neuroscience : MN2020

Identification of De Novo JAK2 and MAPK7 Mutations Related to Autism Spectrum Disorder Using Whole-Exome Sequencing in a Chinese Child and Adolescent Trio-Based Sample.

Jian Jiao, Manxue Zhang, Pingyuan Yang, Yan Huang, Xiao Hu, Jia Cai, Chan Yang, Mingjing Situ, Hui Zhang, Lei Fu and 2 more

Abstract read
In one paragraph

Article in Journal of molecular neuroscience : MN, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. CACNA1D-Related Channelopathies: From Hypertension to Autism.Handbook of experimental pharmacology · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. De novo CACNA1D CaPflugers Archiv : European journal of physiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jian JiaoMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Manxue ZhangMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Pingyuan YangMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Yan HuangMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Xiao HuMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Jia CaiMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Chan YangMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Mingjing SituMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Hui ZhangMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Lei FuMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Kuifang GuoMental Health Center, West China Hospital of Sichuan University, Chengdu, China.
Yi HuangMental Health Center, West China Hospital of Sichuan University, Chengdu, China. huangyu@scu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a neurodevelopmental disorder with high phenotypic and genetic heterogeneity. Whole-exome sequencing studies have shown that de novo single-nucleotide variations (SNVs) play an important role in sporadic ASD. The present study aimed to search for de novo SNVs using whole-exome sequencing in 59 unrelated Chinese ASD sporadic trios, and found 24 genes (including five reported ASD candidate genes CACNA1D, ACHE, YY1, TTN, and FBXO11) with de novo harmful SNVs. Five genes (CACNA1D, JAK2, ACHE, MAPK7, and PRKAG2) classified as "medium-confidence" genes were found to be related to ASD using the Phenolyzer gene analysis tool, which predicts the correlation between the candidate genes and the ASD phenotype. De novo SNVs in JAK2, MAPK7, and PRKAG2 were first found in ASD. Both JAK2 and MAPK7 were involved in the regulation of the MAPK signaling pathway. Gene co-expression and inter-gene interaction networks were constructed and gene expression data in different brain regions were further extracted, revealing that JAK2 and MAPK7 genes were associated with certain previously reported ASD genes and played an important role in early brain development. The findings of this study suggest that the aforementioned five reported ASD genes and JAK2 and MAPK7 may be related to ASD susceptibility. Further investigations of expression studies in cellular and animal models are needed to explore the mechanism underlying the involvement of JAK2 and MAPK7 in ASD.

Indexed as

Polymorphism, Single NucleotideAcetylcholinesteraseAdolescentAMP-Activated Protein KinasesAutism Spectrum DisorderCalcium Channels, L-TypeChildChinaFemaleGPI-Linked ProteinsHumansJanus Kinase 2MaleMitogen-Activated Protein Kinase 7PedigreeWhole Genome SequencingAcetylcholinesteraseACHE protein, humanAMP-Activated Protein KinasesCACNA1D protein, humanCalcium Channels, L-TypeGPI-Linked ProteinsJAK2 protein, humanJanus Kinase 2MAPK7 protein, humanMitogen-Activated Protein Kinase 7PRKAG2 protein, humanAutism spectrum disorderDe novo single-nucleotide variationsJAK2MAPK7Whole-exome sequencing

Identifiers

PMID31838722
PMCPMC7018782

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.