Evidence map›Paper›PMID 31836954›Full record

ArticleFish physiology and biochemistry2020

Grass carp (Ctenopharyngodon idella) Bcl-xl: transcriptional regulation and anti-apoptosis analysis.

Guoqin Qi, Ningli Yu, Kang Xu, Xiaofen Xie, Yuexin Mao, Xin Chen, Xiaoqin Ran, Xingxing Chen, Gang Lin, Chengyu Hu

Abstract read
PubMed Publisher
In one paragraph

Article in Fish physiology and biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Guoqin QiDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Ningli YuDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Kang XuDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Xiaofen XieDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Yuexin MaoDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Xin ChenDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Xiaoqin RanDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Xingxing ChenDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China.
Gang LinDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China. lgang@ncu.edu.cn.
Chengyu HuDepartment of Bioscience, College of Life Science, Nanchang University, Nanchang, 330031, China. hucy2008@163.com.
Nanchang University · CN

Funding

Natural Science Foundation of Jiangxi Province 20171ACB20004
6 · The paper itself

Abstract

Bcl-xl, Bax2, and NF-κB are well-known to be involved in anti-apoptosis response. Although Bcl-xl has been reported in fish, the NF-κB-mediated regulatory mechanism and anti-apoptotic function are still unclear. Here, we cloned and characterized the full-length cDNA sequence of grass carp (Ctenopharyngodon idella) Bcl-xl (CiBcl-xl) and its promoter region sequence. The full-length cDNA of CiBcl-xl is 2836 bp with an ORF of 627 bp encoding a polypeptide of 208 amino acids. Phylogenetic tree analysis revealed that CiBcl-xl shared high homology with Dario rerio Bcl-xl (DrBcl-xl). After stimulation with Poly I:C, the expression of CiBcl-xl in CIK cells and various tested tissues of grass carp were significantly upregulated. To further understand the transcriptional control of fish Bcl-xl induced by NF-κB, CiC-rel and Cip65 were expressed in Escherichia coli BL21 and purified by affinity chromatography with the Ni-NTA His-Bind resin. In vitro, gel mobility shift assays demonstrated the high affinity of CiC-rel and Cip65 with CiBcl-xl promoter. Dual-luciferase reporter assays showed that CiC-rel and Cip65 activated CiBcl-xl promoter. Also, knockdown of CiC-rel and Cip65 reduced the expression of Bcl-xl. Therefore, similar to those of mammals, fish C-rel and p65 can upregulate the transcription of Bcl-xl. In addition, we found that overexpression of CiBcl-xl in CIK cells increased the cell activity and inhibited cell apoptosis, while overexpression of Bax2 promoted cell apoptosis. Meanwhile, co-transfection of CiBcl-xl and CiBax2 into cells can ease up apoptotic rate. To further investigate the molecular basis of synergistic effect of Bcl-xl and Bax2, we showed that Bcl-xl and Bax2 interacted with each other. The results suggested that Bcl-xl executed its anti-apoptotic function by binding to and inhibiting the pro-apoptotic activity of Bax2.

Indexed as

AnimalsApoptosisBase SequenceCarpsDNA, ComplementaryFish ProteinsGene Expression RegulationPoly I-CPromoter Regions, GeneticDNA, ComplementaryFish ProteinsPoly I-CAnti-apoptosisBax2Bcl-xlFishNF-κB

Identifiers

PMID31836954
OpenAlexW2994755059

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.