Evidence map›Paper›PMID 31835662›Full record

ReviewBiomolecules2019

The Role of the Ω-Loop in Regulation of the Catalytic Activity of TEM-Type β-Lactamases.

Alexey Egorov, Maya Rubtsova, Vitaly Grigorenko, Igor Uporov, Alexander Veselovsky

Open access · goldAbstract readReview
In one paragraph

Review in Biomolecules, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 49 citations in OpenAlex.

  1. Virulence · 2026
    Review
  2. Article
  3. A protein dynamics-based deep learning model enhances predictions of fitness and epistasis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Molecular insights into the evolutionary trajectory of aAntimicrobial agents and chemotherapy · 2024
    Article
  9. Clinical emergence of a novel extended-spectrum variant deriving from the OXY-1 β-lactamase.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Exploring avibactam and relebactam inhibition ofAntimicrobial agents and chemotherapy · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Opening of a cryptic pocket in β-lactamase increases penicillinase activity.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Alexey EgorovDepartment Chemistry, M.V. Lomonosov Moscow State University, 3, 1, Leninskie gori, Moscow 119991, Russia.
Maya RubtsovaDepartment Chemistry, M.V. Lomonosov Moscow State University, 3, 1, Leninskie gori, Moscow 119991, Russia.
Vitaly GrigorenkoDepartment Chemistry, M.V. Lomonosov Moscow State University, 3, 1, Leninskie gori, Moscow 119991, Russia.
Igor UporovDepartment Chemistry, M.V. Lomonosov Moscow State University, 3, 1, Leninskie gori, Moscow 119991, Russia.
Alexander VeselovskyInstitute of Biomedical Chemistry, ul. Pogodinskaya 10, Moscow 119121, Russia.
Lomonosov Moscow State University · RUInstitute of Biomedical Chemistry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial resistance to β-lactams, the most commonly used class of antibiotics, poses a global challenge. This resistance is caused by the production of bacterial enzymes that are termed β-lactamases (βLs). The evolution of serine-class A β-lactamases from penicillin-binding proteins (PBPs) is related to the formation of the Ω-loop at the entrance to the enzyme's active site. In this loop, the Glu166 residue plays a key role in the two-step catalytic cycle of hydrolysis. This residue in TEM-type β-lactamases, together with Asn170, is involved in the formation of a hydrogen bonding network with a water molecule, leading to the deacylation of the acyl-enzyme complex and the hydrolysis of the β-lactam ring of the antibiotic. The activity exhibited by the Ω-loop is attributed to the positioning of its N-terminal residues near the catalytically important residues of the active site. The structure of the Ω-loop of TEM-type β-lactamases is characterized by low mutability, a stable topology, and structural flexibility. All of the revealed features of the Ω-loop, as well as the mechanisms related to its involvement in catalysis, make it a potential target for novel allosteric inhibitors of β-lactamases.

Indexed as

BiocatalysisBacteriabeta-LactamasesDrug Resistance, BacterialProtein Conformationbeta-Lactamasesantibiotic resistanceinhibitorTEM-type β-lactamasesβ-lactam antibioticsΩ-loop

Identifiers

PMID31835662
PMCPMC6995641
OpenAlexW2996262407

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.