Evidence map›Paper›PMID 31835351›Full record

ArticleBrain sciences2019

Estimating the Parameters of Fitzhugh-Nagumo Neurons from Neural Spiking Data.

Resat Ozgur Doruk, Laila Abosharb

Abstract read
In one paragraph

Article in Brain sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Spiking Neuron Mathematical Models: A Compact Overview.Bioengineering (Basel, Switzerland) · 2023
    Review
  3. Unbiased estimation of the Hessian for partially observed diffusions.Proceedings. Mathematical, physical, and engineering sciences · 2022
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Resat Ozgur DorukDepartment of Electrical and Electronics Engineering, Atılım University, Incek, Golbasi, 06836 Ankara, Turkey.ORCID 0000-0002-9217-0845
Laila AbosharbDepartment of Electrical and Electronics Engineering, Atılım University, Incek, Golbasi, 06836 Ankara, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A theoretical and computational study on the estimation of the parameters of a single Fitzhugh-Nagumo model is presented. The difference of this work from a conventional system identification is that the measured data only consist of discrete and noisy neural spiking (spike times) data, which contain no amplitude information. The goal can be achieved by applying a maximum likelihood estimation approach where the likelihood function is derived from point process statistics. The firing rate of the neuron was assumed as a nonlinear map (logistic sigmoid) relating it to the membrane potential variable. The stimulus data were generated by a phased cosine Fourier series having fixed amplitude and frequency but a randomly shot phase (shot at each repeated trial). Various values of amplitude, stimulus component size, and sample size were applied to examine the effect of stimulus to the identification process. Results are presented in tabular and graphical forms, which also include statistical analysis (mean and standard deviation of the estimates). We also tested our model using realistic data from a previous research (H1 neurons of blowflies) and found that the estimates have a tendency to converge.

Indexed as

Fitzhugh–Nagumo Modelinhomogeneous Poissonmaximum likelihood estimationneural spikingneuron modelingPoisson processes

Identifiers

PMID31835351
PMCPMC6956007

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.