ArticlePloS one2019
Microbial diversity within the digestive tract contents of Dezhou donkeys.
Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
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Who cites it
30 citing papers in PubMed, 41 citations in OpenAlex.
- A Comprehensive Review of the Equine Gut Microbiome in Health and Disease.Veterinary sciences · 2026Review
- Current Perspectives on the Inflammatory Bowel Disease Pathogenesis of Microbiota and the Gut-Brain Axis, and Emerging Therapeutics.Biomedicines · 2026Review
- Effects of Feeding Strategies on Gut Microbial Communities in Donkeys: A Comprehensive Narrative Review.Veterinary sciences · 2025Review
- Metagenomic Applications to Herbivore Gut Microbiomes: A Comprehensive Review of Microbial Diversity and Host Interactions.Animals : an open access journal from MDPI · 2025Review
- An Overview of Donkey Neonatology.Animals : an open access journal from MDPI · 2025Review
- Dynamic Changes in the Gut Microbiota During Peripartum in Jennies.Animals : an open access journal from MDPI · 2025Article
- Research Progress on Influencing Factors of Gastrointestinal Microbial Diversity in Equine.Veterinary medicine and science · 2025Review
- Advances in Donkey Disease Surveillance and Microbiome Characterization in China.Microorganisms · 2025Review
- Comparative analysis of composition and spatial variations in the foregut microbiota of male and female donkeys.Frontiers in microbiology · 2025Article
- The composition and predictive function of the fecal microbiota in female donkeys across different reproductive cycles.Frontiers in microbiology · 2025Article
- Gut microbiome regulation in equine animals: current understanding and future perspectives.Frontiers in microbiology · 2025Review
- Insights into the Donkey Hindgut Microbiome Using Metagenome-Assembled Genomes.Animals : an open access journal from MDPI · 2024Article
- Remodeling of intestinal bacterial community and metabolome of Dezhou donkey induced by corn silage.Scientific reports · 2024Article
- Effects of Concentrate Feeding Sequence on Growth Performance, Nutrient Digestibility, VFA Production, and Fecal Microbiota of Weaned Donkeys.Animals : an open access journal from MDPI · 2023Article
- Could Weaning Remodel the Oral Microbiota Composition in Donkeys? An Exploratory Study.Animals : an open access journal from MDPI · 2022Article
- Comparative Analysis of Bacterial Diversity between the Liquid Phase and Adherent Fraction within the Donkey Caeco-Colic Ecosystem.Animals : an open access journal from MDPI · 2022Article
- Distribution and Difference of Gastrointestinal Flora in Sheep with Different Body Mass Index.Animals : an open access journal from MDPI · 2022Article
- The Fibrolytic Enzyme Profiles and the Composition of Fungal Communities in Donkey Cecum-Colon Ecosystem.Animals : an open access journal from MDPI · 2022Article
- Integrated multi-omics reveals novel microbe-host lipid metabolism and immune interactions in the donkey hindgut.Frontiers in immunology · 2022Article
- Comparative analysis of intestinal flora between rare wild red-crowned crane and white-naped crane.Frontiers in microbiology · 2022Article
Corrections and comments
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Gastrointestinal microbiota has significant impact on the nutrition and health of monogastric herbivores animals including donkey. However, so far the microbiota in different gastrointestinal compartments of healthy donkey has not been described. Therefore, we investigated the abundance and function of microbiota at different sites of the gastrointestinal tract (GIT) (foregut: stomach, duodenum, jejunum and ileum; hindgut: cecum, ventral colon, dorsal colon, and rectum) of healthy adult donkeys mainly based on 16S rRNA gene sequencing and phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) analysis. Collectively, our results showed that donkey has a rich, diverse and multi-functional microbiota along the GIT. In general, the richness and diversity of the microbiota are much higher in the hindgut relative to that in the foregut; at phylum level, the Firmicutes is dominant in the foregut while both Firmicutes and Bacteroides are abundant in the hindgut; at the genus level, Lactobacillus was dominant in the foregut while Streptococcus was more dominant in the hindgut. Our further PICRUSt analysis showed that varying microbiota along the GIT is functionally compatible with the corresponding physiological function of different GIT sites. For example, the microbes in the foregut are more active at carbohydrate metabolism, and in the hindgut are more active at amino acid metabolism. This work at the first time characterized the donkey digestive system from the aspects of microbial composition and function, provided an important basic data about donkey healthy gastrointestinal microbiota, which may be utilized to evaluate donkey health and also offer clues to further investigate donkey digestive system, nutrition, even to develop the microbial supplements.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.