Evidence map›Paper›PMID 31834877›Full record

ArticlePLoS biology2019

A kinase-dependent checkpoint prevents escape of immature ribosomes into the translating pool.

Melissa D Parker, Jason C Collins, Boguslawa Korona, Homa Ghalei, Katrin Karbstein

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  7. Built differently or defective: can RNA exosomopathies cause ribosome heterogeneity?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  8. Review
  9. Ribosome Assembly and Repair.Annual review of cell and developmental biology · 2024
    Review
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  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Melissa D ParkerDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida, United States of America.ORCID 0000-0002-8816-8355
Jason C CollinsDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida, United States of America.ORCID 0000-0002-7653-0070
Boguslawa KoronaDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida, United States of America.
Homa GhaleiDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida, United States of America.ORCID 0000-0003-0168-4654
Katrin KarbsteinDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida, United States of America.ORCID 0000-0002-4034-1331
Scripps Research Institute · US

Funding

Dissecting the Mechanisms of Regulation and Quality Control in Ribosome Assembly and the Consequences of their FailureR35GM136323 · NIGMS · VANDERBILT UNIVERSITY · PI Katrin Karbstein · 2020 to 2026
$6.1M
Quality Control in Ribosome Assembly - the Function of Regulatory ProteinsR01GM086451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARBSTEIN, KATRIN · 2009 to 2019
$4.8M
Howard Hughes Medical Institute 55108536NIGMS NIH HHS R01 GM086451NIGMS NIH HHS R35 GM136323
6 · The paper itself

Abstract

Premature release of nascent ribosomes into the translating pool must be prevented because these do not support viability and may be prone to mistakes. Here, we show that the kinase Rio1, the nuclease Nob1, and its binding partner Pno1 cooperate to establish a checkpoint that prevents the escape of immature ribosomes into polysomes. Nob1 blocks mRNA recruitment, and rRNA cleavage is required for its dissociation from nascent 40S subunits, thereby setting up a checkpoint for maturation. Rio1 releases Nob1 and Pno1 from pre-40S ribosomes to discharge nascent 40S into the translating pool. Weak-binding Nob1 and Pno1 mutants can bypass the requirement for Rio1, and Pno1 mutants rescue cell viability. In these strains, immature ribosomes escape into the translating pool, where they cause fidelity defects and perturb protein homeostasis. Thus, the Rio1-Nob1-Pno1 network establishes a checkpoint that safeguards against the release of immature ribosomes into the translating pool.

Indexed as

Nuclear ProteinsProtein BindingProtein BiosynthesisProtein Serine-Threonine KinasesRibosomal ProteinsRibosomesRibosome Subunits, Small, EukaryoticRNA, MessengerRNA, Ribosomal, 18SSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsNOB1 protein, S cerevisiaeNuclear ProteinsPNO1 protein, S cerevisiaeProtein Serine-Threonine KinasesRibosomal ProteinsRio1 protein, S cerevisiaeRNA, MessengerRNA, Ribosomal, 18SSaccharomyces cerevisiae Proteins

Identifiers

PMID31834877
PMCPMC6934326
OpenAlexW2995830976

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.