Evidence map›Paper›PMID 31831836›Full record

ArticleScientific reports2019

RNA-binding protein FXR1 is presented in rat brain in amyloid form.

Julia V Sopova, Elena I Koshel, Tatiana A Belashova, Sergey P Zadorsky, Alexandra V Sergeeva, Vera A Siniukova, Alexandr A Shenfeld, Maria E Velizhanina, Kirill V Volkov, Anton A Nizhnikov and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

  1. The prion-like characteristic of ORF3 contributes to virion release and pathogenesis of hepatitis E virus.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Review
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  5. Amyloid Fibrils of the s36 Protein Modulate the Morphogenesis ofInternational journal of molecular sciences · 2024
    Article
  6. Active regulation of amyloidosis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Review
  8. Review
  9. Review
  10. ARL6IP1 mediates small-molecule-induced alleviation of Alzheimer pathology through FXR1-dependent BACE1 translation initiation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Identification of New FG-Repeat Nucleoporins with Amyloid Properties.International journal of molecular sciences · 2023
    Article
  12. Article
  13. Article
  14. Human RAD51 Protein Forms Amyloid-like AggregatesInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Julia V SopovaSt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation.
Elena I KoshelDepartment of Cytology and Histology, St. Petersburg State University, St. Petersburg, Russian Federation.
Tatiana A BelashovaSt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation.
Sergey P ZadorskySt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation.
Alexandra V SergeevaDepartment of Genetics and Biotechnology, St. Petersburg State University, St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0003-0117-9076
Vera A SiniukovaSt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation.
Alexandr A ShenfeldSt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation.
Maria E VelizhaninaDepartment of Genetics and Biotechnology, St. Petersburg State University, St. Petersburg, Russian Federation.
Kirill V VolkovResearch Resource Center "Molecular and Cell Technologies", St. Petersburg, Russian Federation.
Anton A NizhnikovDepartment of Genetics and Biotechnology, St. Petersburg State University, St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0002-8338-3494
Daniel V KachkinLaboratory of Amyloid Biology, St. Petersburg State University, St. Petersburg, Russian Federation.ORCID http://orcid.org/0000-0002-2279-8514
Elena R GaginskayaDepartment of Cytology and Histology, St. Petersburg State University, St. Petersburg, Russian Federation.
Alexey P GalkinSt. Petersburg Branch, Vavilov Institute of General Genetics, St. Petersburg, Russian Federation. a.galkin@spbu.ru.
St Petersburg University · RUITMO University · RURussian Scientific Center of Radiology and Surgical Technologies · RUVavilov Institute of General Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyloids are β-sheets-rich protein fibrils that cause neurodegenerative and other incurable human diseases affecting millions of people worldwide. However, a number of proteins is functional in the amyloid state in various organisms from bacteria to humans. Using an original proteomic approach, we identified a set of proteins forming amyloid-like aggregates in the brain of young healthy rats. One of them is the FXR1 protein, which is known to regulate memory and emotions. We showed that FXR1 clearly colocalizes in cortical neurons with amyloid-specific dyes Congo-Red, Thioflavines S and T. FXR1 extracted from brain by immunoprecipitation shows yellow-green birefringence after staining with Congo red. This protein forms in brain detergent-resistant amyloid oligomers and insoluble aggregates. RNA molecules that are colocalized with FXR1 in cortical neurons are insensitive to treatment with RNase A. All these data suggest that FXR1 functions in rat brain in amyloid form. The N-terminal amyloid-forming fragment of FXR1 is highly conserved across mammals. We assume that the FXR1 protein may be presented in amyloid form in brain of different species of mammals, including humans.

Indexed as

AmyloidAnimalsCerebral CortexFragile X Messenger Ribonucleoprotein 1MaleNeuronsRatsRats, WistarRNA-Binding ProteinsAmyloidFragile X Messenger Ribonucleoprotein 1FXR1 protein, ratRNA-Binding Proteins

Identifiers

PMID31831836
PMCPMC6908614
OpenAlexW2994614703

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.