Evidence map›Paper›PMID 31829210›Full record

ArticleOrphanet journal of rare diseases2019

Outcomes of 4 years of molecular genetic diagnosis on a panel of genes involved in premature aging syndromes, including laminopathies and related disorders.

Maude Grelet, Véronique Blanck, Sabine Sigaudy, Nicole Philip, Fabienne Giuliano, Khaoula Khachnaoui, Godelieve Morel, Sarah Grotto, Julia Sophie, Céline Poirsier and 11 more

Open access · goldAbstract read
In one paragraph

Article in Orphanet journal of rare diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Mutations Involved in Premature-Ageing Syndromes.The application of clinical genetics · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 12 institutions in 1 country.

Maude GreletDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France.
Véronique BlanckDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France.
Sabine SigaudyDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France.
Nicole PhilipDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France.
Fabienne GiulianoMedical Genetics Unit 2, L'Archet Hospital, Nice, France.
Khaoula KhachnaouiMedical Genetics Unit 2, L'Archet Hospital, Nice, France.
Godelieve MorelHospices Civils de Lyon, Genetic Department and National HHT Reference Center, Femme-Mère-Enfants Hospital, F-69677, Bron, France.
Sarah GrottoGenetics Department, AP-HP, Robert-Debré University Hospital, Paris, France.
Julia SophieDepartment of Medical Genetics, CHU Toulouse, Purpan Hospital, 31059, Toulouse, France.
Céline PoirsierDepartment of Genetics, Reims University Hospital, Reims, France.
James LespinasseDepartment of Genetics, Centre Hospitalier de Chambéry- Hôtel-dieu, Chambery, France.
Laurent AlricInternal Medicine, CHU Toulouse, Rangueil Hospital, Toulouse 3 University Hospital Center, Toulouse, France.
Patrick CalvasDepartment of Medical Genetics, CHU Toulouse, Purpan Hospital, 31059, Toulouse, France.
Gihane ChalhoubInternal Medecine, CHR Metz-Thionville, Thionville, France.
Valérie LayetDepartment of Genetics, Le Havre Hospital, F76600, Le Havre, France.
Arnaud MolinDepartment of Genetics, CHU de Caen, Avenue de la Cote de Nacre, 14000, Caen, France.
Cindy ColsonDepartment of Genetics, CHU de Caen, Avenue de la Cote de Nacre, 14000, Caen, France.
Luisa MarsiliDepartment of Clinical Genetics, Lille University Hospital, CHU, Lille, France.
Patrick EderyHospices Civils de Lyon, Genetic Department and National HHT Reference Center, Femme-Mère-Enfants Hospital, F-69677, Bron, France.
Nicolas LévyDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France.
Annachiara De Sandre-GiovannoliDepartment of Medical Genetics, Assistance Publique Hopitaux de Marseille, Marseille, France. annachiara.desandre@ap-hm.fr.ORCID 0000-0002-2324-2462
Inserm · FRCentre Hospitalier Universitaire de Caen Normandie · FRHôpital l'Archet · FRHôpital Purpan · FRUniversité Claude Bernard Lyon 1 · FRAssistance Publique Hôpitaux de Marseille · FRAssistance Publique – Hôpitaux de Paris · FRCentre Hospitalier Métropole Savoie · FRCentre Hospitalier Régional de Metz-Thionville · FRCentre Hospitalier Universitaire de Reims · FRHôpital Rangueil · FRUniversité Le Havre Normandie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSegmental progeroid syndromes are a heterogeneous group of rare and often severe genetic disorders that have been studied since the twentieth century. These progeroid syndromes are defined as segmental because only some of the features observed during natural aging are accelerated.

methodsSince 2015, the Molecular Genetics Laboratory in Marseille La Timone Hospital proposes molecular diagnosis of premature aging syndromes including laminopathies and related disorders upon NGS sequencing of a panel of 82 genes involved in these syndromes. We analyzed the results obtained in 4 years on 66 patients issued from France and abroad.

resultsGlobally, pathogenic or likely pathogenic variants (ACMG class 5 or 4) were identified in about 1/4 of the cases; among these, 9 pathogenic variants were novel. On the other hand, the diagnostic yield of our panel was over 60% when the patients were addressed upon a nosologically specific clinical suspicion, excepted for connective tissue disorders, for which clinical diagnosis may be more challenging. Prenatal testing was proposed to 3 families. We additionally detected 16 variants of uncertain significance and reclassified 3 of them as benign upon segregation analysis in first degree relatives.

conclusionsHigh throughput sequencing using the Laminopathies/ Premature Aging disorders panel allowed molecular diagnosis of rare disorders associated with premature aging features and genetic counseling for families, representing an interesting first-level analysis before whole genome sequencing may be proposed, as a future second step, by the National high throughput sequencing platforms ("Medicine France Genomics 2025" Plan), in families without molecular diagnosis.

Indexed as

AdolescentAdultAgedAging, PrematureChildChild, PreschoolFemaleGenetic CounselingGenetic TestingGenetic VariationGenomicsHigh-Throughput Nucleotide SequencingHumansInfantMaleMiddle AgedPanelPathogenic,variantProgeroid

Identifiers

PMID31829210
PMCPMC6907233
OpenAlexW2995757324

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.