Evidence map›Paper›PMID 31828715›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2020

Genotypic and phenotypic changes of Staphylococcus epidermidis during relapse episodes in prosthetic joint infections.

Silvestre Ortega-Peña, Rafael Franco-Cendejas, Alejandra Aquino-Andrade, Gabriel Betanzos-Cabrera, Ashutosh Sharma, Sandra Rodríguez-Martínez, Mario E Cancino-Diaz, Juan Carlos Cancino-Diaz

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. The road to success of coagulase-negative staphylococci: clinical significance of small colony variants and their pathogenic role in persistent infections.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Silvestre Ortega-PeñaLaboratory of Infectology, Instituto Nacional de Rehabilitación "Luis Guillermo Ibarra Ibarra", 11340, Mexico City, Mexico.ORCID https://orcid.org/0000-0001-8487-3754
Rafael Franco-CendejasLaboratory of Infectology, Instituto Nacional de Rehabilitación "Luis Guillermo Ibarra Ibarra", 11340, Mexico City, Mexico.ORCID https://orcid.org/0000-0003-1574-1138
Alejandra Aquino-AndradeLaboratory of Molecular Microbiology, Instituto Nacional de Pediatría, Mexico City, Mexico.ORCID https://orcid.org/0000-0002-9155-8653
Gabriel Betanzos-CabreraSchool of Engineering and Sciences, Tecnologico de Monterrey, Campus Queretaro, Queretaro, Mexico.ORCID https://orcid.org/0000-0003-2027-6904
Ashutosh SharmaSchool of Engineering and Sciences, Tecnologico de Monterrey, Campus Queretaro, Queretaro, Mexico.ORCID https://orcid.org/0000-0002-9000-1378
Sandra Rodríguez-MartínezMicrobiology and Immunology Departments of Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, Col. Santo Tomas, Mexico City, Mexico.ORCID https://orcid.org/0000-0001-5063-3525
Mario E Cancino-DiazMicrobiology and Immunology Departments of Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, Col. Santo Tomas, Mexico City, Mexico. mecancinod@gmail.com.ORCID https://orcid.org/0000-0003-0271-7892
Juan Carlos Cancino-DiazMicrobiology and Immunology Departments of Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Carpio y Plan de Ayala S/N, Col. Santo Tomas, Mexico City, Mexico. jccancinodiaz@hotmail.com.ORCID https://orcid.org/0000-0002-3708-7010
Instituto Politécnico Nacional · MXInstituto Nacional de Rehabilitación · MXInstituto Nacional de Pediatria · MXInstituto Tecnológico de Querétaro · MXUniversidad Autónoma del Estado de Hidalgo · MX

Funding

Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional 20181167
6 · The paper itself

Abstract

Staphylococcus epidermidis is a coagulase-negative bacterium capable of causing recurrent relapses in prosthetic joint infection (PJI). The aim of this study was to determine if Staphylococcus epidermidis isolates from patients with recurrent relapses of prosthetic joint infection (PJI) changed genotypically (pulsed-field gel electrophoresis (PFGE) pattern analysis and genes involved in biofilm formation) and phenotypically (antimicrobial resistance, biofilm formation) during the different episodes. Four patients with PJI recurrent relapses were evaluated clinically and microbiologically. Genotypic and phenotypic characteristics of 31 S. epidermidis isolates were determined. In all cases, PJI was treated with antimicrobial therapy and resection of the prosthesis without reimplantation. Months later, all patients had a relapse episode and treated with rifampin plus vancomycin and surgical debridement. Changes in the antibiotics resistance profile in isolates from patients 1 and 2 were observed in the two episodes. Patient 1 had four clones A, B, C, and D that were distributed differentially in the two episodes. Similarly, patients 2 and 3 had two clones and subclones (E-E1 and F-F1, respectively), and patient 4 had only the clone G in both episodes. The clone F formed small-colony variants (SCVs). High level of biofilm formation was found in all clones, except for clones D and G. Clones/subclones showed a genotypic variation in icaA, sdrF, bap, sesI, and embp genes. The principal coordinate analysis showed that all clones/subclones were different. These results showed that the initial infective clone of S. epidermidis from PJI, changed genotypically and phenotypically after a second relapse as a response to the treatment.

Indexed as

AdultAgedAnti-Bacterial AgentsBiofilmsCross-Sectional StudiesDrug Resistance, Multiple, BacterialGenotypeHumansJoint ProsthesisMaleMicrobial Sensitivity TestsMiddle AgedPhenotypeProsthesis-Related InfectionsRecurrenceStaphylococcal InfectionsAnti-Bacterial AgentsVirulence FactorsBiofilmCloneProsthetic joint infectionRelapseStaphylococcus epidermidisSubclone

Identifiers

PMID31828715
PMCPMC7203359
OpenAlexW2996432784

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.