Evidence map›Paper›PMID 31828682›Full record

ArticleJournal of plant research2020

Assessment of Polygala paniculata (Polygalaceae) characteristics for evolutionary studies of legume-rhizobia symbiosis.

Yuji Tokumoto, Kayo Hashimoto, Takashi Soyano, Seishiro Aoki, Wataru Iwasaki, Mai Fukuhara, Tomomi Nakagawa, Kazuhiko Saeki, Jun Yokoyama, Hironori Fujita and 1 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Journal of plant research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Rhizobia mitigates autotoxicity inFrontiers in microbiology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Yuji Tokumoto *Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi, 444 8585, Japan.
Kayo Hashimoto *Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi, 444 8585, Japan.
Takashi Soyano *Division of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi, 444 8585, Japan.
Seishiro AokiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, 113 0032, Japan.
Wataru IwasakiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, 113 0032, Japan.
Mai FukuharaDepartment of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, 444 8585, Japan.
Tomomi NakagawaDivision of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Aichi, 464 8602, Japan.
Kazuhiko SaekiDepartment of Biological Sciences and Kyousei Science Center for Life and Nature, Nara Women's University, Nara, 630 8506, Japan.
Jun YokoyamaFaculty of Science, Yamagata University, Yamagata, 990 8560, Japan.
Hironori FujitaDivision of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi, 444 8585, Japan.
Masayoshi KawaguchiDivision of Symbiotic Systems, National Institute for Basic Biology, Okazaki, Aichi, 444 8585, Japan. masayosi@nibb.ac.jp.ORCID http://orcid.org/0000-0002-1032-6261
National Institute for Basic Biology · JPTokyo University of Science · JPNagoya University · JPNara Women's University · JPThe Graduate University for Advanced Studies, SOKENDAI · JPYamagata University · JP

Funding

Ministry of Education, Culture, Sports, Science and Technology 16H01248Ministry of Education, Culture, Sports, Science and Technology 16H06279Ministry of Education, Culture, Sports, Science and Technology 16K08149Ministry of Education, Culture, Sports, Science and Technology 17K07509
6 · The paper itself

Abstract

Root nodule (RN) symbiosis is a mutualistic interaction observed between nitrogen-fixing soil bacteria and nodulating plants, which are scattered in only four orders of angiosperms called nitrogen-fixing clade. Most of legumes engage in RN symbiosis with rhizobia. Molecular genetic analyses with legumes and non-leguminous nodulating plants revealed that RN symbiosis utilizes early signalling components that are required for symbiosis with arbuscular mycorrhizal (AM) fungi. However detailed evolutionary processes are still largely unknown. Comparative analyses with non-nodulating species phylogenetically related to legumes could be better strategies to study the evolution of RN symbiosis in legumes. Polygala paniculata is a non-leguminous species that belongs to a family different from legumes but that is classified into the same order, Fabales. It has appropriate characteristics for cultivation in laboratories: small body size, high fertility and short lifecycles. Therefore, we further assessed whether this species is suitable as a model species for comparative studies with legumes. We first validated that the plant we obtained in Palau was truly P. paniculata by molecular phylogenetic analysis using rbcL sequences. The estimated genome size of this species was less than those of two model legumes, Lotus japonicus and Medicago truncatula. We determined conditions for cultivation in vitro and for hairy root formation from P. paniculata seedlings. It would facilitate to investigate gene functions in this species. The ability of P. paniculata to interact with AM fungi was confirmed by inoculation with Rhizophagus irregularis, suggesting the presence of early signalling factors that might be involved in RN symbiosis. Unexpectedly, branching of root hairs was observed when inoculated with Mesorhizobium loti broad host range strain NZP2037, indicating that P. paniculata has the biological potential to respond to rhizobia. We propose that P. paniculata is used as a model plant for the evolutionary study of RN symbiosis.

Indexed as

PolygalaRhizobiumPhylogenySymbiosisFabalesGenome sizeHairy rootPolygala paniculatarbcLRN symbiosisRoot hair response

Identifiers

PMID31828682
PMCPMC8057963
OpenAlexW2996177335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.