Evidence map›Paper›PMID 31828316›Full record

ArticleMedical mycology2020

Antifungal susceptibility, genotyping, resistance mechanism, and clinical profile of Candida tropicalis blood isolates.

Amir Arastehfar, Farnaz Daneshnia, Ahmed Hafez, Sadegh Khodavaisy, Mohammad-Javad Najafzadeh, Arezoo Charsizadeh, Hossein Zarrinfar, Mohammadreza Salehi, Zahra Zare Shahrabadi, Elahe Sasani and 6 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in Medical mycology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 92 citations in OpenAlex.

  1. Pooled it
  2. Microorganisms · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Pathogens (Basel, Switzerland) · 2025
    Article
  7. Article
  8. Article
  9. [Molecular Epidemiology and Fluconazole Resistance Mechanisms inSichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2025
    Article
  10. Review
  11. Article
  12. Article
  13. Azole Resistance andJournal of fungi (Basel, Switzerland) · 2025
    Article
  14. Article
  15. Review
  16. Antifungal Drug Susceptibility Profile ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2024
    Article
  17. Analysis of CDR1 and MDR1 Gene Expression and ERG11 Substitutions in Clinical Candida tropicalis Isolates from Alexandria, Egypt.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 6 countries.

Amir ArastehfarWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Farnaz DaneshniaWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Ahmed HafezBiotechvana, 46980 Paterna, Valencia, Spain.
Sadegh KhodavaisyDepartment of Medical Parasitology and Mycology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Mohammad-Javad NajafzadehDepartment of Parasitology and Mycology, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Arezoo CharsizadehImmunology, Asthma and Allergy Research Institute, Tehran University of Medical Sciences, Tehran, Iran.
Hossein ZarrinfarAllergy Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Mohammadreza SalehiDepartment of infectious diseases and Tropical Medicine, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Zahra Zare ShahrabadiDepartment of Medical Mycology and Parasitology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran.
Elahe SasaniDepartment of Mycology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran.
Kamiar ZomorodianBasic Sciences in Infectious Diseases Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.
Weihua PanMedical Mycology, Shanghai Changzheng Hospital, Second Military Medical University, Shanghai 200003, China.
Ferry HagenWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Macit IlkitDivision of Mycology, Department of Microbiology, Faculty of Medicine, University of Çukurova, Adana, Turkey.
Markus KostrzewaBruker Daltonik GmbH, Bremen, Germany.
Teun BoekhoutWesterdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Tehran University of Medical Sciences · IRMashhad University of Medical Sciences · IRSecond Military Medical University · CNShiraz University of Medical Sciences · IRWesterdijk Fungal Biodiversity Institute · NLBruker (Germany) · DECukurova University · TRParc Científic de la Universitat de València · ESTarbiat Modares University · IRUniversity Medical Center Utrecht · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida tropicalis is one of the major candidaemia agents, associated with the highest mortality rates among Candida species, and developing resistance to azoles. Little is known about the molecular mechanisms of azole resistance, genotypic diversity, and the clinical background of C. tropicalis infections. Consequently, this study was designed to address those questions. Sixty-four C. tropicalis bloodstream isolates from 62 patients from three cities in Iran (2014-2019) were analyzed. Strain identification, antifungal susceptibility testing, and genotypic diversity analysis were performed by MALDI-TOF MS, CLSI-M27 A3/S4 protocol, and amplified fragment length polymorphism (AFLP) fingerprinting, respectively. Genes related to drug resistance (ERG11, MRR1, TAC1, UPC2, and FKS1 hotspot9s) were sequenced. The overall mortality rate was 59.6% (37/62). Strains were resistant to micafungin [minimum inhibitory concentration (MIC) ≥1 μg/ml, 2/64], itraconazole (MIC > 0.5 μg/ml, 2/64), fluconazole (FLZ; MIC ≥ 8 μg/ml, 4/64), and voriconazole (MIC ≥ 1 μg/ml, 7/64). Pan-azole and FLZ + VRZ resistance were observed in one and two isolates, respectively, while none of the patients were exposed to azoles. MRR1 (T255P, 647S), TAC1 (N164I, R47Q), and UPC2 (T241A, Q340H, T381S) mutations were exclusively identified in FLZ-resistant isolates. AFLP fingerprinting revealed five major and seven minor genotypes; genotype G4 was predominant in all centers. The increasing number of FLZ-R C. tropicalis blood isolates and acquiring FLZ-R in FLZ-naive patients limit the efficiency of FLZ, especially in developing countries. The high mortality rate warrants reaching a consensus regarding the nosocomial mode of C. tropicalis transmission.

Indexed as

AdolescentAdultAgedAged, 80 and overAmplified Fragment Length Polymorphism AnalysisAntifungal AgentsCandida tropicalisCandidemiaChildChild, PreschoolDrug Resistance, FungalFemaleGenetic VariationGenotypeGenotyping TechniquesHumansAntifungal Agentsazole resistancecandidaemiaCandida tropicalisERG11; MRR1; TAC1; UPC2FKS1genotyping

Identifiers

PMID31828316
PMCPMC7398758
OpenAlexW2994629262

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.