Evidence map›Paper›PMID 31828136›Full record

ArticleBioMed research international2019

lncRNA Expression Reveals the Potential Regulatory Roles in Hepatocyte Proliferation during Rat Liver Regeneration.

Haijing Bai, Wei Jin, Jianlin Guo, Yi Ding, Cuifang Chang, Xueqiang Guo, Yaping Song, Jingbo Zhang, Cunshuan Xu

Abstract read
In one paragraph

Article in BioMed research international, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Haijing BaiCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-7974-4285
Wei JinCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-9120-8100
Jianlin GuoCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-4943-1325
Yi DingCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-5715-2086
Cuifang ChangCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-5041-4645
Xueqiang GuoCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0003-2318-8678
Yaping SongCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0002-7445-6049
Jingbo ZhangInstitute of Basic Medical Sciences, Chinese Academy of Medical Sciences, Beijing 100005, China.ORCID https://orcid.org/0000-0003-4816-7283
Cunshuan XuCollege of Life Science, Henan Normal University, Xinxiang 453007, Henan Province, China.ORCID https://orcid.org/0000-0003-4194-5871

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liver regeneration is a tissue growth process after loss or injury of liver tissue, which is a compensatory hyperplasia rather than true regeneration, mainly depending on hepatocyte proliferation. Currently, a large number of studies on hepatocyte proliferation have been conducted. However, studies on the regulation of long noncoding RNA (lncRNA) on hepatocyte proliferation are still limited. To identify specially expressed lncRNA during rat liver regeneration, high-throughput sequencing technology was performed, and a total of 2446 lncRNAs and 4091 mRNAs were identified as significantly differentially expressed. Gene ontology (GO) enrichment analysis was performed to analyze the role of differentially expressed mRNAs, and 695 mRNAs were identified to be related to cell proliferation. Then, an lncRNA-mRNA coexpression network based on the differentially expressed lncRNAs and proliferation-related genes was constructed to analyze the potential function of lncRNAs on hepatocyte proliferation, and ten lncRNAs, NONRATT003557.2, NONRATT005357.2, NONRATT003292.2, NONRATT001466.2, NONRATT003289.2, NONRATT001047.2, NONRATT005180.2, NONRATT004419.2, NONRATT005336.2, and NONRATT005335.2, were selected as key regulatory factors, which may play crucial roles in hepatocyte proliferation during rat liver regeneration. Finally, a protein-protein interaction (PPI) network was established to illuminate the interaction between proliferation-related genes, and ten hub genes (Aurkb, Cdk1, Cdc20, Bub1b, Mad2l1, Kif11, Prc1, Ccna2, Top2a, and Ccnb1) were screened with the MCC method in the PPI network, which may be important biomarkers involved in the hepatocyte proliferation during rat liver regeneration. These results may provide clues for a more comprehensive understanding of the molecular mechanism of hepatocyte proliferation during rat liver regeneration.

Indexed as

AnimalsCell ProliferationHepatocytesHigh-Throughput Nucleotide SequencingHumansLiverLiver RegenerationProtein Interaction MapsRatsRNA, Long NoncodingRNA, MessengerRNA, Long NoncodingRNA, Messenger

Identifiers

PMID31828136
PMCPMC6885160

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.