Evidence map›Paper›PMID 31827310›Full record

ArticleComputational mechanics2019

Performance of preconditioned iterative linear solvers for cardiovascular simulations in rigid and deformable vessels.

Jongmin Seo, Daniele E Schiavazzi, Alison L Marsden

Abstract read
In one paragraph

Article in Computational mechanics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. A Modular Framework for Implicit 3D-0D Coupling in Cardiac Mechanics.Computer methods in applied mechanics and engineering · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Multilevel and multifidelity uncertainty quantification for cardiovascular hemodynamics.Computer methods in applied mechanics and engineering · 2020
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jongmin SeoDepartment of Pediatrics and Institute for Computational and Mathematical Engineering(ICME), Stanford University, Stanford, CA, USA, jongminseo@stanford.edu.
Daniele E SchiavazziDepartment of Applied and Computational Mathematics and Statistics, University of Notre Dame, IN, USA, dschiavazzi@nd.edu.
Alison L MarsdenDepartment of Pediatrics, Bioengineering and ICME, Stanford University, Stanford, CA, USA, amarsden@stanford.edu.

Funding

Multiscale modeling for vein graft failure risk stratification in CABG patientsR01HL123689 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MARSDEN, ALISON L · 2014 to 2018
$1.9M
Enabling reliable cardiovascular simulations via uncertainty quantificationR01EB018302 · NIBIB · STANFORD UNIVERSITY · PI MARSDEN, ALISON L · 2016 to 2019
$1.7M
NHLBI NIH HHS R01 HL123689NIBIB NIH HHS R01 EB018302
6 · The paper itself

Abstract

Computing the solution of linear systems of equations is invariably the most time consuming task in the numerical solutions of PDEs in many fields of computational science. In this study, we focus on the numerical simulation of cardiovascular hemodynamics with rigid and deformable walls, discretized in space and time through the variational multiscale finite element method. We focus on three approaches: the problem agnostic generalized minimum residual (GMRES) and stabilized bi-conjugate gradient (BICGS) methods, and a recently proposed, problem specific, bi-partitioned (BIPN) method. We also perform a comparative analysis of several preconditioners, including diagonal, block-diagonal, incomplete factorization, multigrid, and resistance based methods. Solver performance and matrix characteristics (diagonal dominance, symmetry, sparsity, bandwidth and spectral properties) are first examined for an idealized cylindrical geometry with physiologic boundary conditions and then successively tested on several patient-specific anatomies representative of realistic cardiovascular simulation problems. Incomplete factorization preconditioners provide the best performance and results in terms of both strong and weak scalability. The BIPN method was found to outperform other methods in patient-specific models with rigid walls. In models with deformable walls, BIPN was outperformed by BICG with diagonal and Incomplete LU preconditioners.

Indexed as

Cardiovascular simulationFluid-structure interactionIterative linear solversPreconditioning

Identifiers

PMID31827310
PMCPMC6905469

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.