Evidence map›Paper›PMID 31827134›Full record

ArticleScientific reports2019

MAP2K1 is a potential therapeutic target in erlotinib resistant head and neck squamous cell carcinoma.

Ankit P Jain, Krishna Patel, Sneha Pinto, Aneesha Radhakrishnan, Vishalakshi Nanjappa, Manish Kumar, Remya Raja, Arun H Patil, Anjali Kumari, Malini Manoharan and 12 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Ankit P JainInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Krishna PatelInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Sneha PintoInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Aneesha RadhakrishnanInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Vishalakshi NanjappaInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Manish KumarInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Remya RajaInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Arun H PatilInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Anjali KumariMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
Malini ManoharanMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
Coral KarunakaranMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
Saktivel MuruganMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
T S Keshava PrasadInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Xiaofei ChangDepartment of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, 21231, MD, USA.
Premendu Prakash MathurSchool of Biotechnology, Kalinga Institute of Industrial Technology, Odisha, 751024, India.
Prashant KumarInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Ravi GuptaMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
Rohit GuptaMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
Arati Khanna-GuptaMedgenome Labs Pvt. Ltd., Bangalore, 560099, India.
David SidranskyDepartment of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, 21231, MD, USA.
Aditi ChatterjeeInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India. aditi@ibioinformatics.org.
Harsha GowdaInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India. harsha.gowda@qimrberghofer.edu.au.
Institute of Bioinformatics · INSciGenom Labs (India) · INJohns Hopkins Medicine · USManipal Academy of Higher Education · INYenepoya University · INPondicherry University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epidermal growth factor receptor (EGFR) targeted therapies have shown limited efficacy in head and neck squamous cell carcinoma (HNSCC) patients despite its overexpression. Identifying molecular mechanisms associated with acquired resistance to EGFR-TKIs such as erlotinib remains an unmet need and a therapeutic challenge. In this study, we employed an integrated multi-omics approach to delineate mechanisms associated with acquired resistance to erlotinib by carrying out whole exome sequencing, quantitative proteomic and phosphoproteomic profiling. We observed amplification of several genes including AXL kinase and transcription factor YAP1 resulting in protein overexpression. We also observed expression of constitutively active mutant MAP2K1 (p.K57E) in erlotinib resistant SCC-R cells. An integrated analysis of genomic, proteomic and phosphoproteomic data revealed alterations in MAPK pathway and its downstream targets in SCC-R cells. We demonstrate that erlotinib-resistant cells are sensitive to MAPK pathway inhibition. This study revealed multiple genetic, proteomic and phosphoproteomic alterations associated with erlotinib resistant SCC-R cells. Our data indicates that therapeutic targeting of MAPK pathway is an effective strategy for treating erlotinib-resistant HNSCC tumors.

Indexed as

Antineoplastic AgentsCell Line, TumorDatasets as TopicDrug Delivery SystemsDrug Resistance, NeoplasmEpithelial-Mesenchymal TransitionErlotinib HydrochlorideGenomicsHumansMAP Kinase Kinase 1Metabolic Networks and PathwaysPhenotypeProtein Kinase InhibitorsProteomicsSquamous Cell Carcinoma of Head and NeckWhole Genome SequencingAntineoplastic AgentsErlotinib HydrochlorideMAP2K1 protein, humanMAP Kinase Kinase 1Protein Kinase Inhibitors

Identifiers

PMID31827134
PMCPMC6906491
OpenAlexW2996409665

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.