Evidence map›Paper›PMID 31825716›Full record

ArticleMolecular biology of the cell2020

The extent of Ssa1/Ssa2 Hsp70 chaperone involvement in nuclear protein quality control degradation varies with the substrate.

Ramon D Jones, Charisma Enam, Rebeca Ibarra, Heather R Borror, Kaitlyn E Mostoller, Eric K Fredrickson, JiaBei Lin, Edward Chuang, Zachary March, James Shorter and 3 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. The role of the nucleus in the control of mitochondrial precursor proteins in yeast.Protein science : a publication of the Protein Society · 2026
    Review
  2. Article
  3. HSP70-binding motifs function as protein quality control degrons.Cellular and molecular life sciences : CMLS · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ramon D JonesDepartment of Pharmacology, University of Washington, Seattle, WA 98195.
Charisma EnamDepartment of Pharmacology, University of Washington, Seattle, WA 98195.
Rebeca IbarraDepartment of Chemistry and Biochemistry, University of Nevada, Las Vegas, NV 89154.
Heather R BorrorDepartment of Pharmacology, University of Washington, Seattle, WA 98195.
Kaitlyn E MostollerDepartment of Pharmacology, University of Washington, Seattle, WA 98195.
Eric K FredricksonDepartment of Pharmacology, University of Washington, Seattle, WA 98195.
JiaBei LinDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.
Edward ChuangDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.
Zachary MarchDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.
James ShorterDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.
Tommer RavidDepartment of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Givat-Ram, -Jerusalem 91904, Israel.
Gary KleigerDepartment of Chemistry and Biochemistry, University of Nevada, Las Vegas, NV 89154.
Richard G GardnerDepartment of Pharmacology, University of Washington, Seattle, WA 98195.

Funding

Outreach/Diversity/Pipeline ProjectP20GM103440 · NIGMS · UNIVERSITY OF NEVADA RENO · PI Julia Petereit · 2012 to 2026
$58.0M
Pharmacological Sciences SupplementT32GM007750 · NIGMS · UNIVERSITY OF WASHINGTON · PI ATKINS, WILLIAM M · 1985 to 2023
$12.6M
Defining the mechanistic basis of a prion disaggregaseR01GM099836 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SHORTER, JAMES · 2013 to 2024
$3.9M
Identifying and characterizing protein quality control mechanisms in the nucleusR01AG031136 · NIA · UNIVERSITY OF WASHINGTON · PI GARDNER, RICHARD GEORGE · 2009 to 2013
$1.6M
Mechanisms for poly-ubiquitin chain initiation and elongationR15GM117555 · NIGMS · UNIVERSITY OF NEVADA LAS VEGAS · PI KLEIGER, GARY L. · 2015 to 2018
$785k
NIA NIH HHS R01 AG031136NIGMS NIH HHS P20 GM103440NIGMS NIH HHS R01 GM099836NIGMS NIH HHS R15 GM117555NIGMS NIH HHS T32 GM007750
6 · The paper itself

Abstract

Protein misfolding is a recurring phenomenon that cells must manage; otherwise misfolded proteins can aggregate and become toxic should they persist. To counter this burden, cells have evolved protein quality control (PQC) mechanisms that manage misfolded proteins. Two classes of systems that function in PQC are chaperones that aid in protein folding and ubiquitin-protein ligases that ubiquitinate misfolded proteins for proteasomal degradation. How folding and degradative PQC systems interact and coordinate their respective functions is not yet fully understood. Previous studies of PQC degradation pathways in the endoplasmic reticulum and cytosol have led to the prevailing idea that these pathways require the activity of Hsp70 chaperones. Here, we find that involvement of the budding yeast Hsp70 chaperones Ssa1 and Ssa2 in nuclear PQC degradation varies with the substrate. In particular, nuclear PQC degradation mediated by the yeast ubiquitin-protein ligase San1 often involves Ssa1/Ssa2, but San1 substrate recognition and ubiquitination can proceed without these Hsp70 chaperone functions in vivo and in vitro. Our studies provide new insights into the variability of Hsp70 chaperone involvement with a nuclear PQC degradation pathway.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceCell NucleusCytosolEndoplasmic ReticulumHSP70 Heat-Shock ProteinsMolecular ChaperonesMutationNuclear ProteinsProteasome Endopeptidase ComplexProtein DomainsProtein FoldingProteolysisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinAdenosine TriphosphatasesHSP70 Heat-Shock ProteinsMolecular ChaperonesNuclear ProteinsProteasome Endopeptidase ComplexSaccharomyces cerevisiae ProteinsSAN1 protein, S cerevisiaeSSA1 protein, S cerevisiaeSSA2 protein, S cerevisiaeUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID31825716
PMCPMC7001477

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.