Evidence map›Paper›PMID 31824904›Full record

ArticleFrontiers in public health2019

The Transformation of Reference Microbiology Methods and Surveillance for

Marie Anne Chattaway, Timothy J Dallman, Lesley Larkin, Satheesh Nair, Jacquelyn McCormick, Amy Mikhail, Hassan Hartman, Gauri Godbole, David Powell, Martin Day and 2 more

Abstract read
In one paragraph

Article in Frontiers in public health, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Investigation of a prolonged nursery outbreak ofEpidemiology and infection · 2026
    Article
  6. Article
  7. Phylodynamic analysis ofMicrobial genomics · 2026
    Article
  8. Mind the gap! TypingMicrobial genomics · 2026
    Article
  9. Article
  10. Article
  11. HeterogeneousJournal of medical microbiology · 2025
    Article
  12. Article
  13. Genomic diversity of non-typhoidalMicrobial genomics · 2025
    Article
  14. Article
  15. Whole-genome sequencing for surveillance ofAfrican journal of laboratory medicine · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marie Anne ChattawayGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Timothy J DallmanGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Lesley LarkinTuberculosis, Acute Respiratory, Gastrointestinal, Emerging/Zoonotic Infections, and Travel Health and IHR Division (T.A.R.G.E.T.), Public Health England, London, United Kingdom.
Satheesh NairGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Jacquelyn McCormickTuberculosis, Acute Respiratory, Gastrointestinal, Emerging/Zoonotic Infections, and Travel Health and IHR Division (T.A.R.G.E.T.), Public Health England, London, United Kingdom.
Amy MikhailTuberculosis, Acute Respiratory, Gastrointestinal, Emerging/Zoonotic Infections, and Travel Health and IHR Division (T.A.R.G.E.T.), Public Health England, London, United Kingdom.
Hassan HartmanGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Gauri GodboleGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
David PowellGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Martin DayGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.
Robert SmithPublic Health Wales, Cardiff, United Kingdom.
Kathie GrantGastrointestinal Bacteria Reference Unit, Public Health England, London, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The use of whole genome sequencing (WGS) as a method for supporting outbreak investigations, studying

Indexed as

genomic typingmolecular epidemiologySalmonellaSNP typingWGS

Identifiers

PMID31824904
PMCPMC6881236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.