Evidence map›Paper›PMID 31824571›Full record

ArticleFrontiers in genetics2019

Mapping Recombination Rate on the Autosomal Chromosomes Based on the Persistency of Linkage Disequilibrium Phase Among Autochthonous Beef Cattle Populations in Spain.

Elena Flavia Mouresan, Aldemar González-Rodríguez, Jhon Jacobo Cañas-Álvarez, Sebastián Munilla, Juan Altarriba, Clara Díaz, Jesús A Baró, Antonio Molina, Pascual Lopez-Buesa, Jesús Piedrafita and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Conservation management strategy impacts inbreeding and mutation load in scimitar-horned oryx.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Elena Flavia MouresanDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Aldemar González-RodríguezDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Jhon Jacobo Cañas-ÁlvarezDepartament de Ciència Animal i dels Aliments, Universitat Autònoma de Barcelona, Barcelona, Spain.
Sebastián MunillaDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Juan AltarribaDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Clara DíazDepartamento de Mejora Genética Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain.
Jesús A BaróInstituto Agroalimentario de Aragón (IA2), Zaragoza, Spain.
Antonio MolinaDepartamento de Ciencias Agroforestales, Universidad de Valladolid, Valladolid, Spain.
Pascual Lopez-BuesaDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Jesús PiedrafitaDepartament de Ciència Animal i dels Aliments, Universitat Autònoma de Barcelona, Barcelona, Spain.
Luis VaronaDepartamento de Anatomía, Embriología y Genética Animal, Universidad de Zaragoza, Zaragoza, Spain.
Universidad de Zaragoza · ESUniversitat Autònoma de Barcelona · ESCentro de Investigación y Tecnología Agroalimentaria de Aragón · ESInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria · ESUniversidad de Valladolid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In organisms with sexual reproduction, genetic diversity, and genome evolution are governed by meiotic recombination caused by crossing-over, which is known to vary within the genome. In this study, we propose a simple method to estimate the recombination rate that makes use of the persistency of linkage disequilibrium (LD) phase among closely related populations. The biological material comprised 171 triplets (sire/dam/offspring) from seven populations of autochthonous beef cattle in Spain (Asturiana de los Valles, Avileña-Negra Ibérica, Bruna dels Pirineus, Morucha, Pirenaica, Retinta, and Rubia Gallega), which were genotyped for 777,962 SNPs with the BovineHD BeadChip. After standard quality filtering, we reconstructed the haplotype phases in the parental individuals and calculated the LD by the correlation -

Indexed as

beef cattlegene ontologylinkage disequilibriummultiple populationsrecombination rate

Identifiers

PMID31824571
PMCPMC6880760
OpenAlexW2989764165

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.