Evidence map›Paper›PMID 31823711›Full record

ArticleBMC bioinformatics2019

Game of neutrophils: modeling the balance between apoptosis and necrosis.

Alva Presbitero, Emiliano Mancini, Filippo Castiglione, Valeria V Krzhizhanovskaya, Rick Quax

Open access · goldAbstract read
In one paragraph

Article in BMC bioinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Embracing complexity in sepsis.Critical care (London, England) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Alva PresbiteroITMO University, Saint Petersburg, Russian Federation. avpresbitero@corp.ifmo.ru.ORCID http://orcid.org/0000-0002-0889-9597
Emiliano ManciniUniversity of Amsterdam, Amsterdam, the Netherlands.
Filippo CastiglioneUniversity of Amsterdam, Amsterdam, the Netherlands.
Valeria V KrzhizhanovskayaITMO University, Saint Petersburg, Russian Federation.
Rick QuaxUniversity of Amsterdam, Amsterdam, the Netherlands.
ITMO University · RUUniversity of Amsterdam · NLNational Research Council · IT

Funding

Ministry of Education and Science of the Russian Federation #14.575.21.0161 (26/09/2017). Unique Identification RFMEFI57517X0161
6 · The paper itself

Abstract

backgroundNeutrophils are one of the key players in the human innate immune system (HIIS). In the event of an insult where the body is exposed to inflammation triggering moieties (ITMs), neutrophils are mobilized towards the site of insult and antagonize the inflammation. If the inflammation is cleared, neutrophils go into a programmed death called apoptosis. However, if the insult is intense or persistent, neutrophils take on a violent death pathway called necrosis, which involves the rupture of their cytoplasmic content into the surrounding tissue that causes local tissue damage, thus further aggravating inflammation. This seemingly paradoxical phenomenon fuels the inflammatory process by triggering the recruitment of additional neutrophils to the site of inflammation, aimed to contribute to the complete neutralization of severe inflammation. This delicate balance between the cost and benefit of the neutrophils' choice of death pathway has been optimized during the evolution of the innate immune system. The goal of our work is to understand how the tradeoff between the cost and benefit of the different death pathways of neutrophils, in response to various levels of insults, has been optimized over evolutionary time by using the concepts of evolutionary game theory.

resultsWe show that by using evolutionary game theory, we are able to formulate a game that predicts the percentage of necrosis and apoptosis when exposed to various levels of insults.

conclusionBy adopting an evolutionary perspective, we identify the driving mechanisms leading to the delicate balance between apoptosis and necrosis in neutrophils' cell death in response to different insults. Using our simple model, we verify that indeed, the global cost of remaining ITMs is the driving mechanism that reproduces the percentage of necrosis and apoptosis observed in data and neutrophils need sufficient information of the overall inflammation to be able to pick a death pathway that presumably increases the survival of the organism.

Indexed as

ApoptosisComputational BiologyGame TheoryHumansInflammationNecrosisNeutrophilsApoptosisCellular automataEvolutionary game theoryMean-field approximationNecrosisNeutrophils

Identifiers

PMID31823711
PMCPMC6905093
OpenAlexW2996284486

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.