Evidence map›Paper›PMID 31822788›Full record

ArticleThe ISME journal2020

Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world.

Sandra Jeudy, Lionel Bertaux, Jean-Marie Alempic, Audrey Lartigue, Matthieu Legendre, Lucid Belmudes, Sébastien Santini, Nadège Philippe, Laure Beucher, Emanuele G Biondi and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  11. The polinton-like supergroup of viruses: evolution, molecular biology, and taxonomy.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  12. Review
  13. Natural history of eukaryotic DNA viruses with double jelly-roll major capsid proteins.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
  15. Review
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  19. Designed Multifunctional Peptides for Intracellular Targets.Antibiotics (Basel, Switzerland) · 2022
    Review
  20. Viral Complexity.Biomolecules · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Sandra Jeudy *Aix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France. Sandra.Jeudy@igs.cnrs-mrs.fr.ORCID http://orcid.org/0000-0002-5297-0135
Lionel Bertaux *Aix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.
Jean-Marie AlempicAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.
Audrey LartigueAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.
Matthieu LegendreAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.ORCID http://orcid.org/0000-0002-8413-2910
Lucid BelmudesUniversité Grenoble Alpes, CEA, INSERM, IRIG, BGE, 38000, Grenoble, France.
Sébastien SantiniAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.
Nadège PhilippeAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France.
Laure BeucherUniversité Grenoble Alpes, CEA, INSERM, IRIG, BGE, 38000, Grenoble, France.
Emanuele G BiondiAix-Marseille Université, Centre National de la Recherche Scientifique, Laboratoire de Chimie Bactérienne, Unité Mixte de Recherche 7283; Institut de Microbiologie de la Méditerranée, FR3479, 13009, Marseille, France.
Sissel JuulOxford Nanopore Technologies Ltd, Oxford Science Park, Oxford, UK.
Daniel J TurnerOxford Nanopore Technologies Ltd, Oxford Science Park, Oxford, UK.
Yohann CoutéUniversité Grenoble Alpes, CEA, INSERM, IRIG, BGE, 38000, Grenoble, France.ORCID http://orcid.org/0000-0003-3896-6196
Jean-Michel ClaverieAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France. Jean-Michel.Claverie@univ-amu.fr.
Chantal AbergelAix-Marseille Université, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256; Institut de Microbiologie de la Méditerranée, FR3479, 13288, Marseille, Cedex 9, France. Chantal.Abergel@igs.cnrs-mrs.fr.ORCID http://orcid.org/0000-0003-1875-4049
Aix-Marseille Université · FRInserm · FROxford Nanopore Technologies (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acanthamoeba-infecting Mimiviridae are giant viruses with dsDNA genome up to 1.5 Mb. They build viral factories in the host cytoplasm in which the nuclear-like virus-encoded functions take place. They are themselves the target of infections by 20-kb-dsDNA virophages, replicating in the giant virus factories and can also be found associated with 7-kb-DNA episomes, dubbed transpovirons. Here we isolated a virophage (Zamilon vitis) and two transpovirons respectively associated to B- and C-clade mimiviruses. We found that the virophage could transfer each transpoviron provided the host viruses were devoid of a resident transpoviron (permissive effect). If not, only the resident transpoviron originally isolated from the corresponding virus was replicated and propagated within the virophage progeny (dominance effect). Although B- and C-clade viruses devoid of transpoviron could replicate each transpoviron, they did it with a lower efficiency across clades, suggesting an ongoing process of adaptive co-evolution. We analysed the proteomes of host viruses and virophage particles in search of proteins involved in this adaptation process. This study also highlights a unique example of intricate commensalism in the viral world, where the transpoviron uses the virophage to propagate and where the Zamilon virophage and the transpoviron depend on the giant virus to replicate, without affecting its infectious cycle.

Indexed as

AcanthamoebaGiant VirusesMimiviridaeSymbiosisVirophages

Identifiers

PMID31822788
PMCPMC7031253
OpenAlexW2995999511

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.