Evidence map›Paper›PMID 31821324›Full record

ArticlePloS one2019

RNA-sequencing reveals that STRN, ZNF484 and WNK1 add to the value of mitochondrial MT-COI and COX10 as markers of unstable coronary artery disease.

Paul Holvoet, Bernward Klocke, Maarten Vanhaverbeke, Roxane Menten, Peter Sinnaeve, Emma Raitoharju, Terho Lehtimäki, Niku Oksala, Christian Zinser, Stefan Janssens and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Paul HolvoetDepartment of Cardiovascular Sciences, KU Leuven, Leuven, Belgium.ORCID 0000-0001-9201-0772
Bernward KlockeIntrexon Bioinformatics Germany, Munich, Germany.
Maarten VanhaverbekeDepartment of Clinical Cardiology, UZ Leuven, Leuven, Belgium.ORCID 0000-0002-4385-7069
Roxane MentenDepartment of Cardiovascular Sciences, KU Leuven, Leuven, Belgium.
Peter SinnaeveDepartment of Clinical Cardiology, UZ Leuven, Leuven, Belgium.
Emma RaitoharjuDepartment of Clinical Chemistry, Fimlab Laboratories, Tampere, Finland.
Terho LehtimäkiDepartment of Clinical Chemistry, Fimlab Laboratories, Tampere, Finland.
Niku OksalaDivision of Vascular Surgery, Department of Surgery, Tampere University Hospital, Tampere, Finland.
Christian ZinserIntrexon Bioinformatics Germany, Munich, Germany.
Stefan JanssensDepartment of Clinical Cardiology, UZ Leuven, Leuven, Belgium.
Karin SipidoDepartment of Cardiovascular Sciences, KU Leuven, Leuven, Belgium.
Leo-Pekka LyytikainenDepartment of Clinical Chemistry, Fimlab Laboratories, Tampere, Finland.
Stefano CagninDepartment of Biology, CRIBI Biotechnology Centre, Padova, Italy.ORCID 0000-0001-7271-4625
KU Leuven · BETampere University · FIUniversitair Ziekenhuis Leuven · BETampere University Hospital · FIUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Markers in monocytes, precursors of macrophages, which are related to CAD, are largely unknown. Therefore, we aimed to identify genes in monocytes predictive of a new ischemic event in patients with CAD and/or discriminate between stable CAD and acute coronary syndrome. We included 66 patients with stable CAD, of which 24 developed a new ischemic event, and 19 patients with ACS. Circulating CD14+ monocytes were isolated with magnetic beads. RNA sequencing analysis in monocytes of patients with (n = 13) versus without (n = 11) ischemic event at follow-up and in patients with ACS (n = 12) was validated with qPCR (n = 85). MT-COI, STRN and COX10 predicted new ischemic events in CAD patients (power for separation at 1% error rate of 0.97, 0.90 and 0.77 respectively). Low MT-COI and high STRN were also related to shorter time between blood sampling and event. COX10 and ZNF484 together with MT-COI, STRN and WNK1 separated ACS completely from stable CAD patients. RNA expressions in monocytes of MT-COI, COX10, STRN, WNK1 and ZNF484 were independent of cholesterol lowering and antiplatelet treatment. They were independent of troponin T, a marker of myocardial injury. But, COX10 and ZNF484 in human plaques correlated to plaque markers of M1 macrophage polarization, reflecting vascular injury. Expression of MT-COI, COX10, STRN and WNK1, but not that of ZNF484, PBMCs paired with that in monocytes. The prospective study of relation of MT-COI, COX10, STRN, WNK1 and ZNF484 with unstable CAD is warranted.

Indexed as

Acute Coronary SyndromeAgedAlkyl and Aryl TransferasesBiomarkersCalmodulin-Binding ProteinsCholesterolCoronary AngiographyCoronary Artery DiseaseDiagnosis, DifferentialElectron Transport Complex IVFemaleFollow-Up StudiesHumansMaleMembrane ProteinsMiddle AgedAlkyl and Aryl TransferasesBiomarkersCalmodulin-Binding ProteinsCholesterolCOX10 protein, humancytochrome c oxidase subunit I, humanElectron Transport Complex IVMembrane ProteinsNerve Tissue ProteinsSTRN protein, humanWNK1 protein, humanWNK Lysine-Deficient Protein Kinase 1

Identifiers

PMID31821324
PMCPMC6903720
OpenAlexW2995982922

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.