Evidence map›Paper›PMID 31819970›Full record

ArticleJournal of experimental botany2020

Transcriptional and biochemical analyses of gibberellin expression and content in germinated barley grain.

Natalie S Betts, Christoph Dockter, Oliver Berkowitz, Helen M Collins, Michelle Hooi, Qiongxian Lu, Rachel A Burton, Vincent Bulone, Birgitte Skadhauge, James Whelan and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 55 citations in OpenAlex.

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  12. Genomic analysis for heat and combined heat-drought resilience in bread wheat under field conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  13. QTL x environment modeling of malting barley preharvest sprouting.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Natalie S BettsAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, Australia.
Christoph DockterCarlsberg Research Laboratory, Copenhagen V, Denmark.
Oliver BerkowitzSchool of Life Science and ARC Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Melbourne, VIC, Australia.
Helen M CollinsAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, Australia.
Michelle HooiAdelaide Glycomics, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia.
Qiongxian LuCarlsberg Research Laboratory, Copenhagen V, Denmark.
Rachel A BurtonAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, Australia.
Vincent BuloneAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, Australia.
Birgitte SkadhaugeCarlsberg Research Laboratory, Copenhagen V, Denmark.
James WhelanSchool of Life Science and ARC Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Melbourne, VIC, Australia.
Geoffrey B FincherAustralian Research Council Centre of Excellence in Plant Cell Walls, School of Agriculture, Food and Wine, University of Adelaide, Waite Campus, Glen Osmond, SA, Australia.
Australian Research Council · AUCarlsberg Laboratory · DKLa Trobe University · AUThe University of Adelaide · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mobilization of reserves in germinated cereal grains is critical for early seedling vigour, global crop productivity, and hence food security. Gibberellins (GAs) are central to this process. We have developed a spatio-temporal model that describes the multifaceted mechanisms of GA regulation in germinated barley grain. The model was generated using RNA sequencing transcript data from tissues dissected from intact, germinated grain, which closely match measurements of GA hormones and their metabolites in those tissues. The data show that successful grain germination is underpinned by high concentrations of GA precursors in ungerminated grain, the use of independent metabolic pathways for the synthesis of several bioactive GAs during germination, and a capacity to abort bioactive GA biosynthesis. The most abundant bioactive form is GA1, which is synthesized in the scutellum as a glycosyl conjugate that diffuses to the aleurone, where it stimulates de novo synthesis of a GA3 conjugate and GA4. Synthesis of bioactive GAs in the aleurone provides a mechanism that ensures the hormonal signal is relayed from the scutellum to the distal tip of the grain. The transcript data set of 33 421 genes used to define GA metabolism is available as a resource to analyse other physiological processes in germinated grain.

Indexed as

GibberellinsHordeumGerminationSeedlingsSequence Analysis, RNAGibberellinsAleuronegerminationgibberellic acidHordeum vulgareRNA-seqscutellumsignal transduction

Identifiers

PMID31819970
PMCPMC7242073
OpenAlexW2996427947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.