Evidence map›Paper›PMID 31819106›Full record

ArticleScientific reports2019

An Efficient hybrid filter-wrapper metaheuristic-based gene selection method for high dimensional datasets.

Jamshid Pirgazi, Mohsen Alimoradi, Tahereh Esmaeili Abharian, Mohammad Hossein Olyaee

Abstract read
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Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

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20citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Jamshid PirgaziFaculty of Engineering, Department of Computer Engineering, University of Gonabad, Gonabad, Iran. j.pirgazi@znu.ac.ir.ORCID http://orcid.org/0000-0002-2461-1143
Mohsen AlimoradiFaculty of Electronic, Computer & IT Department of Computer, Qazvin Islamic Azad University, Qazvin, Iran.
Tahereh Esmaeili AbharianFaculty of Electronic, Computer & IT Department of Computer, Qazvin Islamic Azad University, Qazvin, Iran.
Mohammad Hossein OlyaeeFaculty of Engineering, Department of Computer Engineering, University of Gonabad, Gonabad, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Feature selection problem is one of the most significant issues in data classification. The purpose of feature selection is selection of the least number of features in order to increase accuracy and decrease the cost of data classification. In recent years, due to appearance of high-dimensional datasets with low number of samples, classification models have encountered over-fitting problem. Therefore, the need for feature selection methods that are used to remove the extensions and irrelevant features is felt. Recently, although, various methods have been proposed for selecting the optimal subset of features with high precision, these methods have encountered some problems such as instability, high convergence time, selection of a semi-optimal solution as the final result. In other words, they have not been able to fully extract the effective features. In this paper, a hybrid method based on the IWSSr method and Shuffled Frog Leaping Algorithm (SFLA) is proposed to select effective features in a large-scale gene dataset. The proposed algorithm is implemented in two phases: filtering and wrapping. In the filter phase, the Relief method is used for weighting features. Then, in the wrapping phase, by using the SFLA and the IWSSr algorithms, the search for effective features in a feature-rich area is performed. The proposed method is evaluated by using some standard gene expression datasets. The experimental results approve that the proposed approach in comparison to similar methods, has been achieved a more compact set of features along with high accuracy. The source code and testing datasets are available at https://github.com/jimy2020/SFLA_IWSSr-Feature-Selection.

Indexed as

Data Interpretation, StatisticalAlgorithmsComputer SimulationDatabases, GeneticDatasets as TopicFemaleGene Expression ProfilingGene Expression RegulationHumansMachine LearningMaleNeoplasmsOligonucleotide Array Sequence AnalysisReproducibility of ResultsSensitivity and SpecificitySoftware

Identifiers

PMID31819106
PMCPMC6901457

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.