Evidence map›Paper›PMID 31819085›Full record

ArticleScientific reports2019

Culture of Methanogenic Archaea from Human Colostrum and Milk.

Amadou Hamidou Togo, Ghiles Grine, Saber Khelaifia, Clotilde des Robert, Véronique Brevaut, Aurelia Caputo, Emeline Baptiste, Marion Bonnet, Anthony Levasseur, Michel Drancourt and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 67 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Review
  5. Article
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  7. Article
  8. Human microbiome acquisition and transmission.Nature reviews. Microbiology · 2025
    Review
  9. Article
  10. Article
  11. Heliyon · 2024
    Review
  12. Review
  13. Review
  14. Microorganisms · 2024
    Article
  15. Human associated Archaea: a neglected microbiome worth investigating.World journal of microbiology & biotechnology · 2024
    Review
  16. Article
  17. Journal of oral microbiology · 2024
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Amadou Hamidou TogoIHU-Méditerranée Infection, Marseille, France.
Ghiles GrineIHU-Méditerranée Infection, Marseille, France.
Saber KhelaifiaIHU-Méditerranée Infection, Marseille, France.
Clotilde des RobertAPHM, CHU Hôpital de la Conception, Service de médecine néonatale, F-13385, Marseille, France.
Véronique BrevautAPHM, CHU Hôpital Nord, Service de médecine néonatale, Marseille, France.
Aurelia CaputoIHU-Méditerranée Infection, Marseille, France.
Emeline BaptisteIHU-Méditerranée Infection, Marseille, France.
Marion BonnetIHU-Méditerranée Infection, Marseille, France.
Anthony LevasseurIHU-Méditerranée Infection, Marseille, France.
Michel DrancourtIHU-Méditerranée Infection, Marseille, France.
Matthieu MillionIHU-Méditerranée Infection, Marseille, France.
Didier RaoultIHU-Méditerranée Infection, Marseille, France. didier.raoult@gmail.com.
Institut de Recherche pour le Développement · FRMéditerranée Infection Foundation · FRAix-Marseille Université · FRHôpital de la Conception · FRHôpital Nord · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Archaeal sequences have been detected in human colostrum and milk, but no studies have determined whether living archaea are present in either of these fluids. Methanogenic archaea are neglected since they are not detected by usual molecular and culture methods. By using improved DNA detection protocols and microbial culture techniques associated with antioxidants previously developed in our center, we investigated the presence of methanogenic archaea using culture and specific Methanobrevibacter smithii and Methanobrevibacter oralis real-time PCR in human colostrum and milk. M. smithii was isolated from 3 colostrum and 5 milk (day 10) samples. M. oralis was isolated from 1 milk sample. For 2 strains, the genome was sequenced, and the rhizome was similar to that of strains previously isolated from the human mouth and gut. M. smithii was detected in the colostrum or milk of 5/13 (38%) and 37/127 (29%) mothers by culture and qPCR, respectively. The different distribution of maternal body mass index according to the detection of M. smithii suggested an association with maternal metabolic phenotype. M. oralis was not detected by molecular methods. Our results suggest that breastfeeding may contribute to the vertical transmission of these microorganisms and may be essential to seed the infant's microbiota with these neglected critical commensals from the first hour of life.

Indexed as

AnimalsBody Mass IndexBreast FeedingChemoautotrophic GrowthColostrumDNA, ArchaealEuryarchaeotaFecesFemaleHumansInfantMethanobrevibacterMicrobiotaMilk, HumanMothersPregnancyDNA, Archaeal

Identifiers

PMID31819085
PMCPMC6901439
OpenAlexW2991681618

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.