Evidence map›Paper›PMID 31816947›Full record

ArticleMicroorganisms2019

Characterization and Phylodynamics of Reassortant H12Nx Viruses in Northern Eurasia.

Kirill Sharshov, Junki Mine, Ivan Sobolev, Olga Kurskaya, Nikita Dubovitskiy, Marsel Kabilov, Tatiana Alikina, Momoko Nakayama, Ryota Tsunekuni, Anastasiya Derko and 8 more

Abstract read
In one paragraph

Article in Microorganisms, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Kirill SharshovDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Junki MineDivision of Transboundary Animal Disease, National Institute of Animal Health, Tsukuba, Ibaraki 305-0856, Japan.
Ivan SobolevDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Olga KurskayaDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Nikita DubovitskiyDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Marsel KabilovGenomics Core Facility, Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.
Tatiana AlikinaGenomics Core Facility, Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.
Momoko NakayamaDivision of Transboundary Animal Disease, National Institute of Animal Health, Tsukuba, Ibaraki 305-0856, Japan.
Ryota TsunekuniDivision of Transboundary Animal Disease, National Institute of Animal Health, Tsukuba, Ibaraki 305-0856, Japan.
Anastasiya DerkoDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Elena ProkopyevaDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Alexander AlekseevDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Michael ShchelkanovSchool of Biomedicine, Far Eastern Federal University, Vladivostok 690091, Russia.
Alexey DruzyakaLaboratory of behavioral ecology, Institute of Animal Systematics and Ecology, Novosibirsk 630091, Russia.
Alimurad GadzhievDepartment of ecology, Dagestan State University, Makhachkala 367000, Russia.
Yuko UchidaDivision of Transboundary Animal Disease, National Institute of Animal Health, Tsukuba, Ibaraki 305-0856, Japan.
Alexander ShestopalovDepartment of Experimental Modeling and Pathogenesis of Infectious Diseases, Federal Research Center of Fundamental and Translational Medicine, Novosibirsk 630117, Russia.
Takehiko SaitoDivision of Transboundary Animal Disease, National Institute of Animal Health, Tsukuba, Ibaraki 305-0856, Japan.

Funding

Russian Foundation for Fundamental Investigations 17-04-01919Russian President Grant МК-6831.2018.4Russian Science Foundation 17-44-07001
6 · The paper itself

Abstract

Wild waterfowl birds are known to be the main reservoir for a variety of avian influenza viruses of different subtypes. Some subtypes, such as H2Nx, H8Nx, H12Nx, and H14Nx, occur relatively rarely in nature. During 10-year long-term surveillance, we isolated five rare H12N5 and one H12N2 viruses in three different distinct geographic regions of Northern Eurasia and studied their characteristics. H12N2 from the Far East region was a double reassortant containing hemagglutinin (HA), non-structural (NS) and nucleoprotein (NP) segments of the American lineage and others from the classical Eurasian avian-like lineage. H12N5 viruses contain Eurasian lineage segments. We suggest a phylogeographical scheme for reassortment events associated with geographical groups of aquatic birds and their migration flyways. The H12N2 virus is of particular interest as this subtype has been found in common teal in the Russian Far East region, and it has a strong relation to North American avian influenza virus lineages, clearly showing that viral exchange of segments between the two continents does occur. Our results emphasize the importance of Avian Influenza Virus (AIV) surveillance in Northern Eurasia for the annual screening of virus characteristics, including the genetic constellation of rare virus subtypes, to understand the evolutionary ecology of AIV.

Indexed as

American lineageavian influenzaH12Nxmultiple reassortantNorthern Eurasiarare subtypewild birds

Identifiers

PMID31816947
PMCPMC6956379

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.