Evidence map›Paper›PMID 31815673›Full record

ArticleJMIR medical informatics2019

Impact of Automatic Query Generation and Quality Recognition Using Deep Learning to Curate Evidence From Biomedical Literature: Empirical Study.

Muhammad Afzal, Maqbool Hussain, Khalid Mahmood Malik, Sungyoung Lee

Abstract read
In one paragraph

Article in JMIR medical informatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Artificial Intelligence-Based Medical Data Mining.Journal of personalized medicine · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Muhammad AfzalDepartment of Software, Sejong University, Seoul, Republic of Korea.ORCID https://orcid.org/0000-0002-7851-2327
Maqbool HussainDepartment of Software, Sejong University, Seoul, Republic of Korea.ORCID https://orcid.org/0000-0002-1663-1718
Khalid Mahmood MalikDepartment of Computer Science and Engineering, Oakland University, Rochester, MI, United States.ORCID https://orcid.org/0000-0002-7927-3436
Sungyoung LeeDepartment of Computer Science and Engineering, Kyung Hee University, Yongin, Republic of Korea.ORCID https://orcid.org/0000-0002-5962-1587

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe quality of health care is continuously improving and is expected to improve further because of the advancement of machine learning and knowledge-based techniques along with innovation and availability of wearable sensors. With these advancements, health care professionals are now becoming more interested and involved in seeking scientific research evidence from external sources for decision making relevant to medical diagnosis, treatments, and prognosis. Not much work has been done to develop methods for unobtrusive and seamless curation of data from the biomedical literature.

objectiveThis study aimed to design a framework that can enable bringing quality publications intelligently to the users' desk to assist medical practitioners in answering clinical questions and fulfilling their informational needs.

methodsThe proposed framework consists of methods for efficient biomedical literature curation, including the automatic construction of a well-built question, the recognition of evidence quality by proposing extended quality recognition model (E-QRM), and the ranking and summarization of the extracted evidence.

resultsUnlike previous works, the proposed framework systematically integrates the echelons of biomedical literature curation by including methods for searching queries, content quality assessments, and ranking and summarization. Using an ensemble approach, our high-impact classifier E-QRM obtained significantly improved accuracy than the existing quality recognition model (1723/1894, 90.97% vs 1462/1894, 77.21%).

conclusionsOur proposed methods and evaluation demonstrate the validity and rigorousness of the results, which can be used in different applications, including evidence-based medicine, precision medicine, and medical education.

Indexed as

biomedical researchclinical decision support systemsdata curationdeep learningevidence-based medicinemachine learningprecision medicine

Identifiers

PMID31815673
PMCPMC6928703

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.