Evidence map›Paper›PMID 31815623›Full record

ArticleBMC microbiology2019

Change of the duodenal mucosa-associated microbiota is related to intestinal metaplasia.

Jian Gong, Lixiang Li, Xiuli Zuo, Yanqing Li

Registry-linked trialAbstract readComparative Study
In one paragraph

Article in BMC microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04365946 (Microbiome Analysis in Patients With Gastric Intestinal Metaplasia and in Patients With Gastric Cancer and Correlation With the Subtypes of the Lesions), which is not on this map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04365946 unknown statusnot on this mapstarted 2020, after this paper: background citation

Microbiome Analysis in Patients With Gastric Intestinal Metaplasia and in Patients With Gastric Cancer and Correlation With the Subtypes of the Lesions

Typeobservational_patient_registrySponsorUniversity Hospital, IoanninaRan2020 to 2023Enrolled80ConditionsGastric Intestinal Metaplasia, Gastric Cancer, MicrobiomeArmsGastroscopy
3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Duodenal microbiota profiling and its effects on gastrointestinal tract dysfunction.Frontiers in cellular and infection microbiology · 2026
    Article
  3. World journal of gastroenterology · 2024
    Article
  4. Inhibitory Effects ofFoods (Basel, Switzerland) · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Molecular Alterations in Gastric Intestinal Metaplasia.International journal of molecular sciences · 2021
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jian GongDepartment of Gastroenterology, Qilu Hospital, Shandong University, Jinan, 250012, China.
Lixiang LiDepartment of Gastroenterology, Qilu Hospital, Shandong University, Jinan, 250012, China.
Xiuli ZuoDepartment of Gastroenterology, Qilu Hospital, Shandong University, Jinan, 250012, China.
Yanqing LiDepartment of Gastroenterology, Qilu Hospital, Shandong University, Jinan, 250012, China. liyanqing@sdu.edu.cn.ORCID 0000-0001-9325-4808

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn this study, we aimed to investigate the characteristics of the duodenal mucosal microbiota of patients with intestinal metaplasia (IM) and compare it with those of the gastric mucosal microbiota.

methodWe collected the duodenal and gastric mucosal samples from 10 adult patients with IM and 10 healthy controls (HC). The V3-V4 region of the bacterial 16S rRNA gene was examined by high throughput sequencing method.

resultsThe diversity of the HC duodenal microbiota was higher than that of IM patient based on the Shannon and Simpson index while the Chao indices of IM duodenal mucosal microbiota was significantly higher than that of gastric mucosal microbiota of patients with IM. There was a marked difference in the duodenal microbiota structure between patients with IM and HC (ANOSIM, R = 1, P = 0.001). We also found that the Helicobacter pylori infection in gastric mucosa did not influence the structure of duodenal mucosal microbiota. The gastric mucosal microbiota structure significantly differed between patients with IM and HC who were H. pylori-negative (ANOSIM, R = 0.452, P = 0.042) or H. pylori-positive (ANOSIM, R = 0.548, P = 0.003), respectively. For duodenal mucosal microbiota, genera Lactococcus, Flavobacterium, Psychrobacter, Mysroides, Enhydrobacter, Streptococcus, and Leuconostoc were enriched in patients with IM. In contrast, genera Bacillus, Solibacillus, Lysinibacillus, Exiguobacterium, Oceanobacillus, and Paenibacillus were enriched in HC.

conclusionA marked dysbiosis duodenal mucosal microbiota in patients with IM was observed, and this dysbiosis might be responsible for IM pathogenesis.

Indexed as

Gastrointestinal MicrobiomeAdultAgedBacteriaChinaDuodenumDysbiosisFemaleGastric MucosaHelicobacter InfectionsHelicobacter pyloriHigh-Throughput Nucleotide SequencingHumansIntestinal MucosaMetaplasiaMiddle AgedRNA, Ribosomal, 16SDuodenal microbiotaDysbiosisHelicobacter pyloriIntestinal metaplasia

Identifiers

PMID31815623
PMCPMC6900849

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.