Evidence map›Paper›PMID 31815205›Full record

ArticleCommunications biology2019

Telomere analysis using 3D fluorescence microscopy suggests mammalian telomere clustering in hTERT-immortalized Hs68 fibroblasts.

Nancy Adam, Erin Degelman, Sophie Briggs, Rima-Marie Wazen, Pina Colarusso, Karl Riabowol, Tara Beattie

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nancy Adam1Department of Biochemistry & Molecular Biology, University of Calgary, Calgary, AB Canada.
Erin Degelman2Cumming School of Medicine, University of Calgary, Calgary, AB Canada.
Sophie Briggs1Department of Biochemistry & Molecular Biology, University of Calgary, Calgary, AB Canada.
Rima-Marie Wazen3Live Cell Imaging Laboratory, Cumming School of Medicine, University of Calgary, Calgary, AB Canada.
Pina Colarusso3Live Cell Imaging Laboratory, Cumming School of Medicine, University of Calgary, Calgary, AB Canada.
Karl Riabowol1Department of Biochemistry & Molecular Biology, University of Calgary, Calgary, AB Canada.
Tara Beattie1Department of Biochemistry & Molecular Biology, University of Calgary, Calgary, AB Canada.
University of Calgary · CA

Funding

CIHR
6 · The paper itself

Abstract

Telomere length and dynamics are central to understanding cell aging, genomic instability and cancer. Currently, there are limited guidelines for analyzing telomeric features in 3D using different cellular models. Image processing for telomere analysis is of increasing interest in many fields, however a lack of standardization can make comparisons and reproducibility an issue. Here we provide a user's guide for quantitative immunofluorescence microscopy of telomeres in interphase cells that covers image acquisition, processing and analysis. Strategies for determining telomere size and number are identified using normal human diploid Hs68 fibroblasts. We demonstrate how to accurately determine telomere number, length, volume, and degree of clustering using quantitative immunofluorescence. Using this workflow, we make the unexpected observation that hTERT-immortalized Hs68 cells with longer telomeres have fewer resolvable telomeres in interphase. Rigorous quantification indicates that this is due to telomeric clustering, leading to systematic underestimation of telomere number and overestimation of telomere size.

Indexed as

Microscopy, FluorescenceAnimalsFibroblastsHumansImage Processing, Computer-AssistedImaging, Three-DimensionalIn Situ Hybridization, FluorescenceReproducibility of ResultsTelomeraseTelomereTelomere HomeostasisTelomeraseNuclear organizationTelomeresWide-field fluorescence microscopy

Identifiers

PMID31815205
PMCPMC6893014
OpenAlexW2993456748

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.