Evidence map›Paper›PMID 31813848›Full record

ArticleCell chemical biology2020

Combining Stage Specificity and Metabolomic Profiling to Advance Antimalarial Drug Discovery.

James M Murithi, Edward S Owen, Eva S Istvan, Marcus C S Lee, Sabine Ottilie, Kelly Chibale, Daniel E Goldberg, Elizabeth A Winzeler, Manuel Llinás, David A Fidock and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Cell chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 89 citations in OpenAlex.

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  16. Fluorescent Marinoquinoline Derivative as Inhibitors ofJournal of medicinal chemistry · 2025
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  19. Anti-Infective Properties, Cytotoxicity, andPharmaceuticals (Basel, Switzerland) · 2025
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

James M MurithiDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Edward S OwenDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA.
Eva S IstvanDepartment of Medicine, Division of Infectious Diseases, and Department of Molecular Microbiology, Washington University School of Medicine, Saint Louis MO 63130, USA.
Marcus C S LeeParasites and Microbes Programme, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK.
Sabine OttilieSchool of Medicine, University of California San Diego (UCSD), La Jolla, CA 92093, USA.
Kelly ChibaleDrug Discovery and Development Centre (H3D), University of Cape Town, Rondebosch 7701, South Africa; South African Medical Research Council Drug Discovery and Development Research Unit, Department of Chemistry & Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa.
Daniel E GoldbergDepartment of Medicine, Division of Infectious Diseases, and Department of Molecular Microbiology, Washington University School of Medicine, Saint Louis MO 63130, USA.
Elizabeth A WinzelerSchool of Medicine, University of California San Diego (UCSD), La Jolla, CA 92093, USA.
Manuel LlinásDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, USA; Department of Chemistry, Pennsylvania State University, University Park, PA 16802, USA; Huck Center for Malaria Research, Pennsylvania State University, University Park, PA 16802, USA.
David A FidockDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA; Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: df2260@cumc.columbia.edu.
Manu VanaerschotDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: manu.vanaerschot@gmail.com.
Columbia University Irving Medical Center · USPennsylvania State University · USUniversity of California San Diego · USWashington University in St. Louis · USSouth African Medical Research Council · ZAWellcome Sanger Institute · GB

Funding

Role of pfcrt in chloroquine resistance in P. falciparumR01AI050234 · NIAID · YESHIVA UNIVERSITY · PI FIDOCK, DAVID A · 2001 to 2015
$5.7M
Defining the Role of PfCRT and PfMDR1 as Pleiotropic Mediators of Plasmodium falciparum Multidrug ResistanceR37AI050234 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI David A Fidock · 2018 to 2026
$4.4M
Defining P. falciparum resistance to artemisinin-based combination therapiesR01AI109023 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FIDOCK, DAVID A · 2014 to 2025
$4.4M
Elucidating the molecular basis of piperaquine resistance in Plasmodium falciparumR01AI124678 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI David A Fidock · 2016 to 2026
$4.3M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR33AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2019 to 2021
$1.4M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR21AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2017 to 2018
$447k
NIAID NIH HHS R01 AI050234NIAID NIH HHS R01 AI109023NIAID NIH HHS R01 AI124678NIAID NIH HHS R21 AI127581NIAID NIH HHS R33 AI127581NIAID NIH HHS R37 AI050234
6 · The paper itself

Abstract

We report detailed susceptibility profiling of asexual blood stages of the malaria parasite Plasmodium falciparum to clinical and experimental antimalarials, combined with metabolomic fingerprinting. Results revealed a variety of stage-specific and metabolic profiles that differentiated the modes of action of clinical antimalarials including chloroquine, piperaquine, lumefantrine, and mefloquine, and identified late trophozoite-specific peak activity and stage-specific biphasic dose-responses for the mitochondrial inhibitors DSM265 and atovaquone. We also identified experimental antimalarials hitting previously unexplored druggable pathways as reflected by their unique stage specificity and/or metabolic profiles. These included several ring-active compounds, ones affecting hemoglobin catabolism through distinct pathways, and mitochondrial inhibitors with lower propensities for resistance than either DSM265 or atovaquone. This approach, also applicable to other microbes that undergo multiple differentiation steps, provides an effective tool to prioritize compounds for further development within the context of combination therapies.

Indexed as

MetabolomicsAntimalarialsAtovaquoneDrug DesignElectron Transport Chain Complex ProteinsHumansLife Cycle StagesMalaria, FalciparumMetabolomeMitochondriaPiperazinesPlasmodium falciparumQuinolinesAntimalarialsAtovaquoneElectron Transport Chain Complex ProteinspiperaquinePiperazinesQuinolinesasexual blood stagesdrug resistancehemoglobin catabolismmalariametabolomicsmitochondriamode of actionPlasmodium falciparumtarget identification

Identifiers

PMID31813848
PMCPMC7031696
OpenAlexW2991884919

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.