Evidence map›Paper›PMID 31813610›Full record

ArticleCurrent biology : CB2019

Origin of Lactose Fermentation in Kluyveromyces lactis by Interspecies Transfer of a Neo-functionalized Gene Cluster during Domestication.

Javier A Varela, Martina Puricelli, Raúl A Ortiz-Merino, Romina Giacomobono, Stephanie Braun-Galleani, Kenneth H Wolfe, John P Morrissey

Open access · hybridAbstract read
In one paragraph

Article in Current biology : CB, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 82 citations in OpenAlex.

  1. Evolutionary insights into an ancient fungal transition from land to sea.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
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  5. A Lactose-BasedChem & bio engineering · 2025
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  18. Review
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  20. Genotypic and Phenotypic Diversity ofJournal of fungi (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Javier A VarelaSchool of Microbiology, Centre for Synthetic Biology and Biotechnology, Environmental Research Institute, APC Microbiome Ireland, University College Cork, Cork T12YN60, Ireland.
Martina PuricelliSchool of Microbiology, Centre for Synthetic Biology and Biotechnology, Environmental Research Institute, APC Microbiome Ireland, University College Cork, Cork T12YN60, Ireland.
Raúl A Ortiz-MerinoDepartment of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 Delft, the Netherlands.
Romina GiacomobonoSchool of Microbiology, Centre for Synthetic Biology and Biotechnology, Environmental Research Institute, APC Microbiome Ireland, University College Cork, Cork T12YN60, Ireland.
Stephanie Braun-GalleaniUCD Conway Institute, School of Medicine, University College Dublin, Dublin 4 D04 C7X2, Ireland.
Kenneth H WolfeUCD Conway Institute, School of Medicine, University College Dublin, Dublin 4 D04 C7X2, Ireland.
John P MorrisseySchool of Microbiology, Centre for Synthetic Biology and Biotechnology, Environmental Research Institute, APC Microbiome Ireland, University College Cork, Cork T12YN60, Ireland. Electronic address: j.morrissey@ucc.ie.
APC Microbiome Institute · IEUniversity College Dublin · IEDelft University of Technology · NLUniversity College Cork · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Humans have used yeasts to make cheese and kefir for millennia, but the ability to ferment the milk sugar lactose is found in only a few yeast species, of which the foremost is Kluyveromyces lactis [1]. Two genes, LAC12 (lactose permease) and LAC4 (lactase), are sufficient for lactose uptake and hydrolysis to glucose and galactose [2]. Here, we show that these genes have a complex evolutionary history in the genus Kluyveromyces that is likely the result of human activity during domestication. We show that the ancestral Lac12 was bifunctional, able to import both lactose and cellobiose into the cell. These disaccharides were then hydrolyzed by Lac4 in the case of lactose or Cel2 in the case of cellobiose. A second cellobiose transporter, Cel1, was also present ancestrally. In the K. lactis lineage, the ancestral LAC12 and LAC4 were lost and a separate upheaval in the sister species K. marxianus resulted in loss of CEL1 and quadruplication of LAC12. One of these LAC12 genes became neofunctionalized to encode an efficient lactose transporter capable of supporting fermentation, specifically in dairy strains of K. marxianus, where it formed a LAC4-LAC12-CEL2 gene cluster, although another remained a cellobiose transporter. Then, the ability to ferment lactose was acquired very recently by K. lactis var. lactis by introgression of LAC12 and LAC4 on a 15-kb subtelomeric region from a dairy strain of K. marxianus. The genomic history of the LAC genes shows that strong selective pressures were imposed on yeasts by early dairy farmers.

Indexed as

CellobioseDomesticationEvolution, MolecularFermentationFungal ProteinsGene Expression Regulation, FungalGenome, FungalGenotypeKluyveromycesLactoseMultigene FamilyPhenotypePhylogenyCellobioseFungal ProteinsLactoseclusterdomesticationfermentationintrogressionKluyveromyceslactislactosemarxianusneofunctionalizationyeast

Identifiers

PMID31813610
PMCPMC6926475
OpenAlexW2992174694

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.